RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 GOPCQ9HD26 462 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 SLC45A1Q9Y2W3 748 aa11.07□□□□□ -0.64
ACTN4-207ENST00000495553 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.07□□□□□ -0.64
ACTN4-207ENST00000495553 GPR25O00155 361 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 CPLX1O14810 134 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 EEF2P13639 858 aaKnown RBP11.06□□□□□ -0.64
ACTN4-207ENST00000495553 OSBPP22059 807 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 GNAQP50148 359 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 METAP2P50579 478 aaKnown RBP eCLIP11.06□□□□□ -0.649e-9■■■□□ 18.4
ACTN4-207ENST00000495553 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
ACTN4-207ENST00000495553 APOBRQ0VD83 1088 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 DGKZQ13574 1117 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 SEC23AQ15436 765 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 CLEC10AQ8IUN9 316 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 SMCR8Q8TEV9 937 aaPredicted RBP11.06□□□□□ -0.64
ACTN4-207ENST00000495553 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 RBM28Q9NW13 759 aaKnown RBP11.06□□□□□ -0.64
ACTN4-207ENST00000495553 KIF3AQ9Y496 699 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 OTOFQ9HC10 1997 aa11.06□□□□□ -0.64
ACTN4-207ENST00000495553 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 A0A1W2PRG0 241 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 GOLGA8AA7E2F4 631 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 RAD21O60216 631 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 NMT2O60551 498 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 TLR2O60603 784 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 FKTNO75072 461 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 CYP2C8P10632 490 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 EVCP57679 992 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
ACTN4-207ENST00000495553 MICU3Q86XE3 530 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 ZNF654Q8IZM8 581 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 NUP133Q8WUM0 1156 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 LPAR1Q92633 364 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 TMX3Q96JJ7 454 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 C12orf42Q96LP6 360 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 MAP3K14Q99558 947 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 TMEM47Q9BQJ4 181 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
ACTN4-207ENST00000495553 IL17RBQ9NRM6 502 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 TPCN1Q9ULQ1 816 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
ACTN4-207ENST00000495553 TMX2Q9Y320 296 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 SIPA1L1O43166 1804 aa11.05□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L15C9J2P7 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L13C9JLJ4 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L11C9JVI0 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L18D6R9N7 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L22D6RA61 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L17D6RBQ6 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 PFKFB2O60825 505 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 VCAM1P19320 739 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 PDIA3P30101 505 aaKnown RBP11.04□□□□□ -0.64
ACTN4-207ENST00000495553 HOXA7P31268 230 aaPredicted RBP11.04□□□□□ -0.64
ACTN4-207ENST00000495553 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
ACTN4-207ENST00000495553 SP3Q02447 781 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 STK3Q13188 491 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 RTN1Q16799 776 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 ASPRV1Q53RT3 343 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 SIAH1Q8IUQ4 282 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 ZNF296Q8WUU4 475 aaPredicted RBP11.04□□□□□ -0.64
ACTN4-207ENST00000495553 DCAF4Q8WV16 495 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 MKL1Q969V6 931 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 IPO9Q96P70 1041 aaKnown RBP11.04□□□□□ -0.64
ACTN4-207ENST00000495553 LZTS2Q9BRK4 669 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 ASCC2Q9H1I8 757 aaPredicted RBP11.04□□□□□ -0.64
ACTN4-207ENST00000495553 VCPKMTQ9H867 229 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 CPA4Q9UI42 421 aa11.04□□□□□ -0.64
ACTN4-207ENST00000495553 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
ACTN4-207ENST00000495553 NOVP48745 357 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 KIF22Q14807 665 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 ARHGEF6Q15052 776 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 GPATCH4Q5T3I0 446 aaKnown RBP11.03□□□□□ -0.64
ACTN4-207ENST00000495553 RCSD1Q6JBY9 416 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 TRIM22Q8IYM9 498 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 SPICE1Q8N0Z3 855 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 FANCBQ8NB91 859 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 GTF3C6Q969F1 213 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
ACTN4-207ENST00000495553 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
ACTN4-207ENST00000495553 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
ACTN4-207ENST00000495553 TANGO6Q9C0B7 1094 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
ACTN4-207ENST00000495553 DOCK1Q14185 1865 aa11.03□□□□□ -0.64
ACTN4-207ENST00000495553 SLC1A4P43007 532 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 GCLCP48506 637 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms