RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 SNHG28P0DPA3 235 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 NF2P35240 595 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 SLC1A4P43007 532 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 TTBK2Q6IQ55 1244 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 ZNF526Q8TF50 670 aaPredicted RBP20.29■□□□□ 0.84
PSMB4-206ENST00000495288 FEZ1Q99689 392 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 GOPCQ9HD26 462 aa20.29■□□□□ 0.84
PSMB4-206ENST00000495288 SCN4AP35499 1836 aa20.28■□□□□ 0.84
PSMB4-206ENST00000495288 PPP1R12BO60237 982 aaPredicted RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 BAG4O95429 457 aaKnown RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 TTLL12Q14166 644 aaPredicted RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 ZYXQ15942 572 aaKnown RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 PKN1Q16512 942 aa20.28■□□□□ 0.84
PSMB4-206ENST00000495288 SLC35G1Q2M3R5 365 aa20.28■□□□□ 0.84
PSMB4-206ENST00000495288 GPATCH4Q5T3I0 446 aaKnown RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 KRT40Q6A162 431 aa20.28■□□□□ 0.84
PSMB4-206ENST00000495288 SCYL3Q8IZE3 742 aa20.28■□□□□ 0.84
PSMB4-206ENST00000495288 KLRG1Q96E93 195 aa20.28■□□□□ 0.84
PSMB4-206ENST00000495288 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 RBM27Q9P2N5 1060 aaKnown RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
PSMB4-206ENST00000495288 WDR90Q96KV7 1748 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 POTEIP0CG38 1075 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 POTEJP0CG39 1038 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 SMARCA1P28370 1054 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 SLC16A2P36021 539 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 MAP3K9P80192 1104 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 NFKBIBQ15653 356 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 RRP36Q96EU6 259 aaKnown RBP20.27■□□□□ 0.84
PSMB4-206ENST00000495288 CHAMP1Q96JM3 812 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 SPZ1Q9BXG8 430 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 SYNPO2Q9UMS6 1093 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 ATP6V1DQ9Y5K8 247 aa20.27■□□□□ 0.84
PSMB4-206ENST00000495288 CYTH3O43739 400 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 BMP3P12645 472 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 SCG2P13521 617 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 XBP1P17861 261 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 IKQ13123 557 aaPredicted RBP20.26■□□□□ 0.83
PSMB4-206ENST00000495288 MAP1SQ66K74 1059 aaPredicted RBP20.26■□□□□ 0.83
PSMB4-206ENST00000495288 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 GMCL1Q96IK5 515 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 VPS54Q9P1Q0 977 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 KCNJ14Q9UNX9 436 aa20.26■□□□□ 0.83
PSMB4-206ENST00000495288 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
PSMB4-206ENST00000495288 MYH4Q9Y623 1939 aa20.25■□□□□ 0.83
PSMB4-206ENST00000495288 IREB2P48200 963 aaKnown RBP20.25■□□□□ 0.83
PSMB4-206ENST00000495288 RESTQ13127 1097 aa20.25■□□□□ 0.83
PSMB4-206ENST00000495288 GNL2Q13823 731 aaKnown RBP20.25■□□□□ 0.83
PSMB4-206ENST00000495288 SAFBQ15424 915 aaKnown RBP eCLIP20.25■□□□□ 0.83
PSMB4-206ENST00000495288 PFKFB3Q16875 520 aaPredicted RBP20.25■□□□□ 0.83
PSMB4-206ENST00000495288 PIGSQ96S52 555 aa20.25■□□□□ 0.83
PSMB4-206ENST00000495288 ZSCAN16Q9H4T2 348 aaPredicted RBP20.25■□□□□ 0.83
PSMB4-206ENST00000495288 VCPKMTQ9H867 229 aa20.25■□□□□ 0.83
PSMB4-206ENST00000495288 AS3MTQ9HBK9 375 aa20.25■□□□□ 0.83
PSMB4-206ENST00000495288 SEC63Q9UGP8 760 aaKnown RBP20.25■□□□□ 0.83
PSMB4-206ENST00000495288 TMEM232C9JQI7 657 aa20.24■□□□□ 0.83
PSMB4-206ENST00000495288 MCM4P33991 863 aa20.24■□□□□ 0.83
PSMB4-206ENST00000495288 KIAA1755Q5JYT7 1200 aa20.24■□□□□ 0.83
PSMB4-206ENST00000495288 ADGRF4Q8IZF3 695 aa20.24■□□□□ 0.83
PSMB4-206ENST00000495288 RIOX1Q9H6W3 641 aa20.24■□□□□ 0.83
PSMB4-206ENST00000495288 NMRK2Q9NPI5 230 aa20.24■□□□□ 0.83
PSMB4-206ENST00000495288 ZHX2Q9Y6X8 837 aa20.24■□□□□ 0.83
PSMB4-206ENST00000495288 USP17L10C9JJH3 530 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 PTPRAP18433 802 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 NCLP19338 710 aaKnown RBP20.23■□□□□ 0.83
PSMB4-206ENST00000495288 SPP2Q13103 211 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 FAM83BQ5T0W9 1011 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 FAM173BQ6P4H8 233 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 HEATR3Q7Z4Q2 680 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 RGS22Q8NE09 1264 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.23■□□□□ 0.83
PSMB4-206ENST00000495288 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.832e-6■■■□□ 14.8
PSMB4-206ENST00000495288 JMJD4Q9H9V9 463 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 CSADQ9Y600 493 aa20.23■□□□□ 0.83
PSMB4-206ENST00000495288 GOLGA6L22H0YM25 854 aa20.22■□□□□ 0.83
PSMB4-206ENST00000495288 NLRP5P59047 1200 aa20.22■□□□□ 0.83
PSMB4-206ENST00000495288 NOL9Q5SY16 702 aaKnown RBP20.22■□□□□ 0.83
PSMB4-206ENST00000495288 CLEC17AQ6ZS10 378 aa20.22■□□□□ 0.83
PSMB4-206ENST00000495288 MOB2Q70IA6 237 aa20.22■□□□□ 0.83
PSMB4-206ENST00000495288 WDR18Q9BV38 432 aa20.22■□□□□ 0.83
PSMB4-206ENST00000495288 KIAA1683Q9H0B3 1180 aa20.22■□□□□ 0.83
PSMB4-206ENST00000495288 TRAF5O00463 557 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 MMP1P03956 469 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
PSMB4-206ENST00000495288 DNM1Q05193 864 aaKnown RBP20.21■□□□□ 0.83
PSMB4-206ENST00000495288 NBR1Q14596 966 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 SYDE2Q5VT97 1194 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 SAMD1Q6SPF0 538 aaPredicted RBP20.21■□□□□ 0.83
PSMB4-206ENST00000495288 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
PSMB4-206ENST00000495288 ARMC9Q7Z3E5 817 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 LDHDQ86WU2 507 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 ZNF280CQ8ND82 737 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 ZNF408Q9H9D4 720 aa20.21■□□□□ 0.83
PSMB4-206ENST00000495288 TFIP11Q9UBB9 837 aaKnown RBP20.21■□□□□ 0.83
PSMB4-206ENST00000495288 TRIM75PA6NK02 468 aa20.2■□□□□ 0.82
PSMB4-206ENST00000495288 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
PSMB4-206ENST00000495288 MTMR2Q13614 643 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms