RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 NDUFB10O96000 172 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
BRD3-206ENST00000494743 KLRC3Q07444 240 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 ZNF543Q08ER8 600 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 SLC35G1Q2M3R5 365 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 CPLX2Q6PUV4 134 aaKnown RBP14.07□□□□□ -0.16
BRD3-206ENST00000494743 MOB2Q70IA6 237 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 SRBD1Q8N5C6 995 aaKnown RBP14.07□□□□□ -0.16
BRD3-206ENST00000494743 DCAF4Q8WV16 495 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 KIAA1683Q9H0B3 1180 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 PICK1Q9NRD5 415 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 CNTNAP5Q8WYK1 1306 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 STK36Q9NRP7 1315 aa14.07□□□□□ -0.16
BRD3-206ENST00000494743 PPFIA3O75145 1194 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 FMNL1O95466 1100 aaPredicted RBP14.06□□□□□ -0.16
BRD3-206ENST00000494743 GOLGA8HP0CJ92 632 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 GNAQP50148 359 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 ASPRV1Q53RT3 343 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 LDLRAD1Q5T700 205 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 SLFN13Q68D06 897 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 ANKRD13AQ8IZ07 590 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 CMTR1Q8N1G2 835 aaKnown RBP14.06□□□□□ -0.16
BRD3-206ENST00000494743 PHKBQ93100 1093 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 DDX11Q96FC9 970 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
BRD3-206ENST00000494743 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 ATAD5Q96QE3 1844 aa14.06□□□□□ -0.16
BRD3-206ENST00000494743 POLR2AP24928 1970 aaKnown RBP14.05□□□□□ -0.16
BRD3-206ENST00000494743 OTOFQ9HC10 1997 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 CASP8AP2Q9UKL3 1982 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 UNCXA6NJT0 531 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 CYTH3O43739 400 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 FKBP1BP68106 108 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 GPATCH4Q5T3I0 446 aaKnown RBP14.05□□□□□ -0.16
BRD3-206ENST00000494743 PRPF38BQ5VTL8 546 aaKnown RBP14.05□□□□□ -0.16
BRD3-206ENST00000494743 LZTS2Q9BRK4 669 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 SPZ1Q9BXG8 430 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 RNF26Q9BY78 433 aaPredicted RBP14.05□□□□□ -0.16
BRD3-206ENST00000494743 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 ORC3Q9UBD5 711 aaPredicted RBP14.05□□□□□ -0.16
BRD3-206ENST00000494743 TSKSQ9UJT2 592 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 ABT1Q9ULW3 272 aaKnown RBP14.05□□□□□ -0.16
BRD3-206ENST00000494743 CSADQ9Y600 493 aa14.05□□□□□ -0.16
BRD3-206ENST00000494743 FRMPD2Q68DX3 1309 aaPredicted RBP14.05□□□□□ -0.16
BRD3-206ENST00000494743 SPDYE5A6NIY4 337 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 USP17L10C9JJH3 530 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 KLRF2D3W0D1 207 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 UBE2Q2LH0YL09 131 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 SMARCA1P28370 1054 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 SLC1A4P43007 532 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 BACE1P56817 501 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 MTMR2Q13614 643 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 PKP1Q13835 747 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 ARMC9Q7Z3E5 817 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 ZNF280CQ8ND82 737 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 CLMNQ96JQ2 1002 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 SLC26A6Q9BXS9 759 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 AS3MTQ9HBK9 375 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 AFG3L2Q9Y4W6 797 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 ZHX2Q9Y6X8 837 aa14.04□□□□□ -0.16
BRD3-206ENST00000494743 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
BRD3-206ENST00000494743 CELF2O95319 508 aaKnown RBP14.03□□□□□ -0.16
BRD3-206ENST00000494743 BMP3P12645 472 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 SYT1P21579 422 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 USP14P54578 494 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 SSRP1Q08945 709 aaKnown RBP14.03□□□□□ -0.16
BRD3-206ENST00000494743 SPP2Q13103 211 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 TTLL12Q14166 644 aaPredicted RBP14.03□□□□□ -0.16
BRD3-206ENST00000494743 PKN1Q16512 942 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 CST9Q5W186 159 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 TRIM22Q8IYM9 498 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 SPICE1Q8N0Z3 855 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 FAM184AQ8NB25 1140 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 LPAR1Q92633 364 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 C12orf42Q96LP6 360 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
BRD3-206ENST00000494743 FEZ1Q99689 392 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 CPVLQ9H3G5 476 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 RIOX1Q9H6W3 641 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 ZNF408Q9H9D4 720 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 ELP3Q9H9T3 547 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 GBA2Q9HCG7 927 aaPredicted RBP14.03□□□□□ -0.16
BRD3-206ENST00000494743 CHMP5Q9NZZ3 219 aa14.03□□□□□ -0.16
BRD3-206ENST00000494743 TRIM75PA6NK02 468 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 DEXIO95424 95 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 BRD1O95696 1058 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 PDCP20941 246 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 PPATQ06203 517 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 DGKZQ13574 1117 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 ZYXQ15942 572 aaKnown RBP14.02□□□□□ -0.17
BRD3-206ENST00000494743 SH3D19Q5HYK7 790 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 TTBK2Q6IQ55 1244 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 BTNL9Q6UXG8 535 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms