RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 SMC1BQ8NDV3 1235 aa16.38■□□□□ 0.21
UBE3C-207ENST00000494532 CLMNQ96JQ2 1002 aa16.38■□□□□ 0.21
UBE3C-207ENST00000494532 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
UBE3C-207ENST00000494532 KIAA1683Q9H0B3 1180 aa16.38■□□□□ 0.21
UBE3C-207ENST00000494532 UNCXA6NJT0 531 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 TRIM75PA6NK02 468 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 USP14P54578 494 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 MTMR2Q13614 643 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
UBE3C-207ENST00000494532 LDLRAD1Q5T700 205 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 TRIM22Q8IYM9 498 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 SPICE1Q8N0Z3 855 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
UBE3C-207ENST00000494532 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 PHKBQ93100 1093 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 GMCL1Q96IK5 515 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 ORC3Q9UBD5 711 aaPredicted RBP16.37■□□□□ 0.21
UBE3C-207ENST00000494532 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 MYH6P13533 1939 aa16.37■□□□□ 0.21
UBE3C-207ENST00000494532 KLRF2D3W0D1 207 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
UBE3C-207ENST00000494532 BMP3P12645 472 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
UBE3C-207ENST00000494532 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 KCTD1Q719H9 257 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 ERO1BQ86YB8 467 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
UBE3C-207ENST00000494532 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 AFG3L2Q9Y4W6 797 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
UBE3C-207ENST00000494532 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 BACE1P56817 501 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 PPATQ06203 517 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 FUT2Q10981 343 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
UBE3C-207ENST00000494532 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 LPAR1Q92633 364 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 SLC10A4Q96EP9 437 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
UBE3C-207ENST00000494532 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
UBE3C-207ENST00000494532 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
UBE3C-207ENST00000494532 IKQ13123 557 aaPredicted RBP16.34■□□□□ 0.21
UBE3C-207ENST00000494532 PPIL2Q13356 520 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 CST9Q5W186 159 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 TTBK2Q6IQ55 1244 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 ZNF784Q8NCA9 323 aaPredicted RBP16.34■□□□□ 0.21
UBE3C-207ENST00000494532 SPZ1Q9BXG8 430 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 UBA5Q9GZZ9 404 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 EMILIN3Q9NT22 766 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 PTPRFP10586 1907 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 PASKQ96RG2 1323 aa16.34■□□□□ 0.21
UBE3C-207ENST00000494532 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
UBE3C-207ENST00000494532 TOMM70O94826 608 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 DEXIO95424 95 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 FDPSP14324 419 aaKnown RBP16.33■□□□□ 0.2
UBE3C-207ENST00000494532 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 DDIT3P35638 169 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 HMGCS2P54868 508 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 PIBF1Q8WXW3 757 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 WASF1Q92558 559 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 OPTNQ96CV9 577 aa16.33■□□□□ 0.2
UBE3C-207ENST00000494532 RBM27Q9P2N5 1060 aaKnown RBP16.33■□□□□ 0.2
UBE3C-207ENST00000494532 CIZ1Q9ULV3 898 aaPredicted RBP16.33■□□□□ 0.2
UBE3C-207ENST00000494532 V9GY48 417 aaPredicted RBP16.33■□□□□ 0.2
UBE3C-207ENST00000494532 CYTH3O43739 400 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 PDCP20941 246 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 SLC16A2P36021 539 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 FOSBP53539 338 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 DGKZQ13574 1117 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 SLC35G1Q2M3R5 365 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 LARP1BQ659C4 914 aaKnown RBP16.32■□□□□ 0.2
UBE3C-207ENST00000494532 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
UBE3C-207ENST00000494532 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 VAT1LQ9HCJ6 419 aa16.32■□□□□ 0.2
UBE3C-207ENST00000494532 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
UBE3C-207ENST00000494532 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 CXCL11O14625 94 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 IRF6O14896 467 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 VCAM1P19320 739 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 STAT2P52630 851 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 HUNKP57058 714 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 SH3D19Q5HYK7 790 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 BTNL9Q6UXG8 535 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 CHURC1Q8WUH1 139 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 WNK4Q96J92 1243 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 ALG1Q9BT22 464 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
UBE3C-207ENST00000494532 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms