RNA–Protein interactions for RNA: ENST00000494509.1

AC055758.1-201, humanhuman

TSL 3 BASIC

Gene AC055758.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055758.1-201ENST00000494509 PRDM10Q9NQV6 1147 aa7.57□□□□□ -1.2
AC055758.1-201ENST00000494509 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
AC055758.1-201ENST00000494509 ARID1BQ8NFD5 2236 aaPredicted RBP7.57□□□□□ -1.2
AC055758.1-201ENST00000494509 TNRC18O15417 2968 aaPredicted RBP7.57□□□□□ -1.2
AC055758.1-201ENST00000494509 PHACTR2O75167 634 aa7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 VEGFAP15692 232 aaPredicted RBP7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 PCSK2P16519 638 aa7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 CTCFP49711 727 aaPredicted RBP7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 GSTM4Q03013 218 aa7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 SOX4Q06945 474 aaPredicted RBP7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 PAOXQ6QHF9 649 aa7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 ZAR1Q86SH2 424 aa7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 MYH14Q7Z406 1995 aaKnown RBP7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 RAB3GAP2Q9H2M9 1393 aa7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 DLEC1Q9Y238 1755 aa7.56□□□□□ -1.2
AC055758.1-201ENST00000494509 CACNA1SQ13698 1873 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 COL5A3P25940 1745 aaPredicted RBP7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 AFDNP55196 1824 aaKnown RBP7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 CYP26A1O43174 497 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 POLR3DP05423 398 aaPredicted RBP7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 ADH5P11766 374 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 USP11P51784 963 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 JAG1P78504 1218 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 DALRD3Q5D0E6 543 aaKnown RBP7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 VSIG10LQ86VR7 867 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 USHBP1Q8N6Y0 703 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 LINC00116Q8NCU8 138 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 GIMAP7Q8NHV1 300 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 RAPGEF4Q8WZA2 1011 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 ABHD8Q96I13 439 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 ACTL7BQ9Y614 415 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
AC055758.1-201ENST00000494509 CGNL1Q0VF96 1302 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 PCDH11XQ9BZA7 1347 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 PCDH11YQ9BZA8 1340 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 FZD6O60353 706 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 EDN3P14138 238 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 AMPHP49418 695 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 TMF1P82094 1093 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 CPSF6Q16630 551 aaKnown RBP eCLIP7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 WFDC3Q8IUB2 231 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 TP53INP2Q8IXH6 220 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 SNX29Q8TEQ0 813 aa7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 ZC3H7BQ9UGR2 993 aaKnown RBP7.54□□□□□ -1.2
AC055758.1-201ENST00000494509 CASP8AP2Q9UKL3 1982 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 EDC4Q6P2E9 1401 aaKnown RBP7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 CCDC85CA6NKD9 419 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 ECEL1O95672 775 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 ITGB5P18084 799 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 HOXC9P31274 260 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 LBX1P52954 281 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 ZNF423Q2M1K9 1284 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 HDGFL2Q7Z4V5 671 aaPredicted RBP7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 NLGN1Q8N2Q7 840 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 TMC1Q8TDI8 760 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 PAK6Q9NQU5 681 aaPredicted RBP7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 CD163L1Q9NR16 1453 aa7.53□□□□□ -1.2
AC055758.1-201ENST00000494509 SMG6Q86US8 1419 aaKnown RBP7.52□□□□□ -1.2
AC055758.1-201ENST00000494509 CNTNAP1P78357 1384 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 GLTPD2A6NH11 291 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 NFICP08651 508 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 NPR3P17342 541 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 KCNA3P22001 575 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 TTC16Q8NEE8 873 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 PIGBQ92521 554 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 FBXL18Q96ME1 805 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 METTL22Q9BUU2 404 aaPredicted RBP7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 BSDC1Q9NW68 430 aaPredicted RBP7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.21
AC055758.1-201ENST00000494509 FER1L6Q2WGJ9 1857 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 ZNF831Q5JPB2 1677 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 TMEM88BA6NKF7 163 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 C8AP07357 584 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 RAB6AP20340 208 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 MAOBP27338 520 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 GRIA4P48058 902 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 ITPK1Q13572 414 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 SPRED3Q2MJR0 410 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 ZNF765Q7L2R6 523 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 FLCNQ8NFG4 579 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 SEMA6CQ9H3T2 930 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 ZFYVE28Q9HCC9 887 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 KDM6AO15550 1401 aaPredicted RBP7.51□□□□□ -1.21
AC055758.1-201ENST00000494509 SCN4AP35499 1836 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 KIF20BQ96Q89 1820 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 CYP27B1O15528 508 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 DYNC1LI2O43237 492 aaPredicted RBP7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 GYS1P13807 737 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 LMNB1P20700 586 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 FBLN1P23142 703 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 CHRNA5P30532 468 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 RFC4P35249 363 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 PCDH1Q08174 1060 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 TCF12Q99081 682 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 TRIM56Q9BRZ2 755 aaKnown RBP7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 LRRC4CQ9HCJ2 640 aa7.5□□□□□ -1.21
AC055758.1-201ENST00000494509 A0A1W2PP64 1363 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms