RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 LTBP1Q14766 1721 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 H3BRB1 525 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 ALDH1L1O75891 902 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 FAM13AO94988 1023 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 BMP4P12644 408 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 EPB42P16452 691 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 TBC1D10BQ4KMP7 808 aaPredicted RBP10.19□□□□□ -0.78
RIF1-211ENST00000494333 NOM1Q5C9Z4 860 aaKnown RBP10.19□□□□□ -0.78
RIF1-211ENST00000494333 CST9Q5W186 159 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 LMBR1LQ6UX01 489 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 ATCAYQ86WG3 371 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 RGL4Q8IZJ4 473 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 SSH1Q8WYL5 1049 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 GLIS2Q9BZE0 524 aaPredicted RBP10.19□□□□□ -0.78
RIF1-211ENST00000494333 ANKRD2Q9GZV1 360 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 TUT1Q9H6E5 874 aaKnown RBP10.19□□□□□ -0.78
RIF1-211ENST00000494333 ABT1Q9ULW3 272 aaKnown RBP10.19□□□□□ -0.78
RIF1-211ENST00000494333 LEMD3Q9Y2U8 911 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 IVNS1ABPQ9Y6Y0 642 aa10.19□□□□□ -0.78
RIF1-211ENST00000494333 CNTNAP1P78357 1384 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 EGFRP00533 1210 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 EIF1AXP47813 144 aaKnown RBP10.18□□□□□ -0.78
RIF1-211ENST00000494333 SRSF11Q05519 484 aaKnown RBP10.18□□□□□ -0.78
RIF1-211ENST00000494333 ECM1Q16610 540 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 EPHA10Q5JZY3 1008 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 CDC37L1Q7L3B6 337 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 SLC30A3Q99726 388 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 LRRC37AA6NMS7 1700 aa10.18□□□□□ -0.78
RIF1-211ENST00000494333 ADAMTSL1Q8N6G6 1762 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 ZNF804BA4D1E1 1349 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 SOWAHDA6NJG2 315 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 RASSF10A6NK89 507 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 PATL2C9JE40 543 aaKnown RBP10.17□□□□□ -0.78
RIF1-211ENST00000494333 TAF5LO75529 589 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 CELF2O95319 508 aaKnown RBP10.17□□□□□ -0.78
RIF1-211ENST00000494333 NBPF7P0C2Y1 421 aaPredicted RBP10.17□□□□□ -0.78
RIF1-211ENST00000494333 HSPA1AP0DMV8 641 aaKnown RBP10.17□□□□□ -0.78
RIF1-211ENST00000494333 HSPA1BP0DMV9 641 aaKnown RBP10.17□□□□□ -0.78
RIF1-211ENST00000494333 KCNJ4P48050 445 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 CHRNDQ07001 517 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 USP48Q86UV5 1035 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 TXNRD3Q86VQ6 643 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 GLYCTKQ8IVS8 523 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 AGBL3Q8NEM8 1001 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 COA1Q9GZY4 146 aa10.17□□□□□ -0.78
RIF1-211ENST00000494333 MED23Q9ULK4 1368 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 PTPRCP08575 1304 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 SNAP23O00161 211 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 WIPF1O43516 503 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 SPEM2Q0P670 501 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 KIF4BQ2VIQ3 1234 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 TAF7LQ5H9L4 462 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 ALKBH2Q6NS38 261 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 DLK2Q6UY11 383 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 LDHAL6AQ6ZMR3 332 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 TRMT2AQ8IZ69 625 aaKnown RBP10.16□□□□□ -0.78
RIF1-211ENST00000494333 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
RIF1-211ENST00000494333 GPR152Q8TDT2 470 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 DCPSQ96C86 337 aaKnown RBP10.16□□□□□ -0.78
RIF1-211ENST00000494333 SUCLG2Q96I99 432 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 ZNF408Q9H9D4 720 aa10.16□□□□□ -0.78
RIF1-211ENST00000494333 WDR33Q9C0J8 1336 aaKnown RBP10.15□□□□□ -0.78
RIF1-211ENST00000494333 PLIN1O60240 522 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 KLRK1P26718 216 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 MAP2K3P46734 347 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 GRM1Q13255 1194 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 ALDH1L2Q3SY69 923 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 COL13A1Q5TAT6 717 aaPredicted RBP10.15□□□□□ -0.78
RIF1-211ENST00000494333 KRT26Q7Z3Y9 468 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 KAZALD1Q96I82 304 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 GMLQ99445 158 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 MXD3Q9BW11 206 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 GSX2Q9BZM3 304 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 CNNM1Q9NRU3 951 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 SMC4Q9NTJ3 1288 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 FAM13BQ9NYF5 915 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 KCNMB2Q9Y691 235 aa10.15□□□□□ -0.78
RIF1-211ENST00000494333 SLURP2P0DP57 97 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 ZNF280AP59817 542 aaPredicted RBP10.14□□□□□ -0.79
RIF1-211ENST00000494333 AAMPQ13685 434 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 DACT2Q5SW24 774 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 STRIP1Q5VSL9 837 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 TTLL5Q6EMB2 1281 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 CYP4F22Q6NT55 531 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 RAB44Q7Z6P3 723 aaPredicted RBP10.14□□□□□ -0.79
RIF1-211ENST00000494333 SAPCD2Q86UD0 394 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 PIK3R5Q8WYR1 880 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 EDEM1Q92611 657 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 USP44Q9H0E7 712 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 MYOZ2Q9NPC6 264 aa10.14□□□□□ -0.79
RIF1-211ENST00000494333 UTYO14607 1347 aa10.13□□□□□ -0.79
RIF1-211ENST00000494333 ASTN2O75129 1339 aaPredicted RBP10.13□□□□□ -0.79
RIF1-211ENST00000494333 ADM5C9JUS6 153 aa10.13□□□□□ -0.79
RIF1-211ENST00000494333 CT47B1P0C2W7 299 aaPredicted RBP10.13□□□□□ -0.79
RIF1-211ENST00000494333 ECE1P42892 770 aa10.13□□□□□ -0.79
RIF1-211ENST00000494333 ARHGAP4P98171 946 aa10.13□□□□□ -0.79
RIF1-211ENST00000494333 CCINQ13939 588 aa10.13□□□□□ -0.79
RIF1-211ENST00000494333 TRIP4Q15650 581 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms