RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 LIMS1P48059 325 aa4.2□□□□□ -1.74
PTPN12-212ENST00000494248 ATXN1P54253 815 aaKnown RBP4.2□□□□□ -1.74
PTPN12-212ENST00000494248 ERVFRD-1P60508 538 aa4.2□□□□□ -1.74
PTPN12-212ENST00000494248 NT5DC1Q5TFE4 455 aa4.2□□□□□ -1.74
PTPN12-212ENST00000494248 ZFPM1Q8IX07 1006 aa4.2□□□□□ -1.74
PTPN12-212ENST00000494248 TMC1Q8TDI8 760 aa4.2□□□□□ -1.74
PTPN12-212ENST00000494248 SPATA25Q9BR10 227 aa4.2□□□□□ -1.74
PTPN12-212ENST00000494248 PLA2G1BP04054 148 aaKnown RBP4.19□□□□□ -1.74
PTPN12-212ENST00000494248 C6P13671 934 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 PNLIPP16233 465 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 FBLN1P23142 703 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 SLC6A19Q695T7 634 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 TMC6Q7Z403 805 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 USHBP1Q8N6Y0 703 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 ACSF2Q96CM8 615 aaPredicted RBP4.19□□□□□ -1.74
PTPN12-212ENST00000494248 HHIPL1Q96JK4 782 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 OSBPL7Q9BZF2 842 aa4.19□□□□□ -1.74
PTPN12-212ENST00000494248 TMEM82A0PJX8 343 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 UPK3BL1B0FP48 263 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 UPK3BL2E5RIL1 263 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 PGRP06401 933 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 ZNF20P17024 532 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 RPL10P27635 214 aaKnown RBP4.18□□□□□ -1.74
PTPN12-212ENST00000494248 ACVRL1P37023 503 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 CAP1Q01518 475 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 CPZQ66K79 652 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 B4GALNT3Q6L9W6 998 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 ZPBP2Q6X784 338 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 CEP128Q6ZU80 1094 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 MCATQ8IVS2 390 aaKnown RBP4.18□□□□□ -1.74
PTPN12-212ENST00000494248 DDX1Q92499 740 aaKnown RBP4.18□□□□□ -1.74
PTPN12-212ENST00000494248 SYTL4Q96C24 671 aaPredicted RBP4.18□□□□□ -1.74
PTPN12-212ENST00000494248 MAP6Q96JE9 813 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 C1QTNF3Q9BXJ4 246 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 PPM1HQ9ULR3 514 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 PCDHB5Q9Y5E4 795 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 IRS2Q9Y4H2 1338 aa4.18□□□□□ -1.74
PTPN12-212ENST00000494248 GSTT1P30711 240 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 CNR2P34972 360 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 SEPT6Q14141 434 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 SLC14A2Q15849 920 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 LIPIQ6XZB0 460 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 ANKRD24Q8TF21 1146 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 DMRTB1Q96MA1 342 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 C8orf49Q96NF6 230 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 KCNH3Q9ULD8 1083 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 PLA2G2DQ9UNK4 145 aa4.17□□□□□ -1.74
PTPN12-212ENST00000494248 ABLIM1O14639 778 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 NOBOXO60393 691 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 TACR2P21452 398 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 KIR2DL1P43626 348 aaPredicted RBP4.16□□□□□ -1.74
PTPN12-212ENST00000494248 KIR2DL2P43627 348 aaPredicted RBP4.16□□□□□ -1.74
PTPN12-212ENST00000494248 CEBPAP49715 358 aaPredicted RBP4.16□□□□□ -1.74
PTPN12-212ENST00000494248 DLX2Q07687 328 aaPredicted RBP4.16□□□□□ -1.74
PTPN12-212ENST00000494248 WAPLQ7Z5K2 1190 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 SPRED1Q7Z699 444 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 FNIP1Q8TF40 1166 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 ZNF526Q8TF50 670 aaPredicted RBP4.16□□□□□ -1.74
PTPN12-212ENST00000494248 RBCK1Q9BYM8 510 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 PRDM14Q9GZV8 571 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 USP40Q9NVE5 1235 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 ZMYM5Q9UJ78 669 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 USTQ9Y2C2 406 aa4.16□□□□□ -1.74
PTPN12-212ENST00000494248 DSC3Q14574 896 aa4.15□□□□□ -1.75
PTPN12-212ENST00000494248 RNF141Q8WVD5 230 aa4.15□□□□□ -1.75
PTPN12-212ENST00000494248 SETDB2Q96T68 719 aa4.15□□□□□ -1.75
PTPN12-212ENST00000494248 FOXP3Q9BZS1 431 aa4.15□□□□□ -1.75
PTPN12-212ENST00000494248 PNMA6FA0A0J9YX94 578 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 NUDT19A8MXV4 375 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 MPOP05164 745 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 GDF5P43026 501 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 RAB3GAP1Q15042 981 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 ENOX2Q16206 610 aaKnown RBP4.14□□□□□ -1.75
PTPN12-212ENST00000494248 OLFML2BQ68BL8 750 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 CRIP3Q6Q6R5 217 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 TMC7Q7Z402 723 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 CCDC82Q8N4S0 544 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 CYB5D2Q8WUJ1 264 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 LNPKQ9C0E8 428 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 SUSD2Q9UGT4 822 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 CORINQ9Y5Q5 1042 aa4.14□□□□□ -1.75
PTPN12-212ENST00000494248 CYR61O00622 381 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 RTP1P59025 263 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 CBX2Q14781 532 aaPredicted RBP4.13□□□□□ -1.75
PTPN12-212ENST00000494248 CDSNQ15517 529 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 HSF5Q4G112 596 aaPredicted RBP4.13□□□□□ -1.75
PTPN12-212ENST00000494248 TTBK2Q6IQ55 1244 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 RPTNQ6XPR3 784 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 RNF111Q6ZNA4 994 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 SAPCD2Q86UD0 394 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 KREMEN1Q96MU8 473 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 HDAC8Q9BY41 377 aa4.13□□□□□ -1.75
PTPN12-212ENST00000494248 ARID3CA6NKF2 412 aa4.12□□□□□ -1.75
PTPN12-212ENST00000494248 FADS2P1A8MWK0 482 aa4.12□□□□□ -1.75
PTPN12-212ENST00000494248 MSL3P1P0C860 447 aa4.12□□□□□ -1.75
PTPN12-212ENST00000494248 ATF2P15336 505 aa4.12□□□□□ -1.75
PTPN12-212ENST00000494248 HTRA3P83110 453 aa4.12□□□□□ -1.75
PTPN12-212ENST00000494248 ZNF200P98182 395 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms