RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
ACTB-213ENST00000493945 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 CCL15Q16663 113 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 RTN1Q16799 776 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 CCDC84Q86UT8 332 aaPredicted RBP17.38■□□□□ 0.37
ACTB-213ENST00000493945 CHURC1Q8WUH1 139 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 TANGO6Q9C0B7 1094 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 ZCCHC17Q9NP64 241 aaKnown RBP17.38■□□□□ 0.37
ACTB-213ENST00000493945 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 AGTPBP1Q9UPW5 1226 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 SLC45A1Q9Y2W3 748 aa17.38■□□□□ 0.37
ACTB-213ENST00000493945 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
ACTB-213ENST00000493945 A0A1W2PRG0 241 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L15C9J2P7 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L13C9JLJ4 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L11C9JVI0 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L18D6R9N7 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L22D6RA61 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L17D6RBQ6 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L19D6RCP7 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L20D6RJB6 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 FDX1P10109 184 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 PDHBP11177 359 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 VCAM1P19320 739 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 STAT2P52630 851 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 USP17L24Q0WX57 530 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 TRAF1Q13077 416 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 GRM1Q13255 1194 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
ACTB-213ENST00000493945 GRM4Q14833 912 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 CAPNS2Q96L46 248 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 RBM27Q9P2N5 1060 aaKnown RBP17.37■□□□□ 0.37
ACTB-213ENST00000493945 FEM1BQ9UK73 627 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 NID2Q14112 1375 aa17.37■□□□□ 0.37
ACTB-213ENST00000493945 ALDH1A1P00352 501 aa17.36■□□□□ 0.37
ACTB-213ENST00000493945 MKRN3Q13064 507 aaKnown RBP17.36■□□□□ 0.37
ACTB-213ENST00000493945 NOL8Q76FK4 1167 aaKnown RBP17.36■□□□□ 0.37
ACTB-213ENST00000493945 SPICE1Q8N0Z3 855 aa17.36■□□□□ 0.37
ACTB-213ENST00000493945 FANCBQ8NB91 859 aa17.36■□□□□ 0.37
ACTB-213ENST00000493945 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
ACTB-213ENST00000493945 PARK7Q99497 189 aaKnown RBP17.36■□□□□ 0.37
ACTB-213ENST00000493945 PLA2G6O60733 806 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 SNHG28P0DPA3 235 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 AKAP17AQ02040 695 aaKnown RBP17.35■□□□□ 0.37
ACTB-213ENST00000493945 ZNF543Q08ER8 600 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 TROAPQ12815 778 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 ANKRD23Q86SG2 305 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 SIAH1Q8IUQ4 282 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 TRIM22Q8IYM9 498 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 SNX21Q969T3 373 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 RPAP3Q9H6T3 665 aaPredicted RBP17.35■□□□□ 0.37
ACTB-213ENST00000493945 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
ACTB-213ENST00000493945 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
ACTB-213ENST00000493945 FLOT1O75955 427 aa17.34■□□□□ 0.37
ACTB-213ENST00000493945 HSP90AA1P07900 732 aaKnown RBP17.34■□□□□ 0.37
ACTB-213ENST00000493945 SMARCA1P28370 1054 aa17.34■□□□□ 0.37
ACTB-213ENST00000493945 MAP2K2P36507 400 aa17.34■□□□□ 0.37
ACTB-213ENST00000493945 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
ACTB-213ENST00000493945 SLF1Q9BQI6 1058 aa17.34■□□□□ 0.37
ACTB-213ENST00000493945 EMILIN3Q9NT22 766 aa17.34■□□□□ 0.37
ACTB-213ENST00000493945 HOXC10Q9NYD6 342 aa17.34■□□□□ 0.37
ACTB-213ENST00000493945 SEC63Q9UGP8 760 aaKnown RBP17.34■□□□□ 0.37
ACTB-213ENST00000493945 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.36
ACTB-213ENST00000493945 TESPA1A2RU30 521 aaPredicted RBP17.33■□□□□ 0.36
ACTB-213ENST00000493945 TMEM232C9JQI7 657 aa17.33■□□□□ 0.36
ACTB-213ENST00000493945 PFKFB2O60825 505 aa17.33■□□□□ 0.36
ACTB-213ENST00000493945 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.36
ACTB-213ENST00000493945 HOXA7P31268 230 aaPredicted RBP17.33■□□□□ 0.36
ACTB-213ENST00000493945 GJA5P36382 358 aa17.33■□□□□ 0.36
ACTB-213ENST00000493945 MB21D1Q8N884 522 aa17.33■□□□□ 0.36
ACTB-213ENST00000493945 NKX2-3Q8TAU0 364 aa17.33■□□□□ 0.36
ACTB-213ENST00000493945 SMCR8Q8TEV9 937 aaPredicted RBP17.33■□□□□ 0.36
ACTB-213ENST00000493945 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.36
ACTB-213ENST00000493945 BRPF3Q9ULD4 1205 aa17.33■□□□□ 0.36
ACTB-213ENST00000493945 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
ACTB-213ENST00000493945 FRMPD2Q68DX3 1309 aaPredicted RBP17.32■□□□□ 0.36
ACTB-213ENST00000493945 FAM155AB1AL88 458 aaPredicted RBP17.32■□□□□ 0.36
ACTB-213ENST00000493945 KLRF2D3W0D1 207 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 K7ELQ4 463 aaPredicted RBP17.32■□□□□ 0.36
ACTB-213ENST00000493945 STK3Q13188 491 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 COG2Q14746 738 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 PRPF38AQ8NAV1 312 aaKnown RBP17.32■□□□□ 0.36
ACTB-213ENST00000493945 GTF3C6Q969F1 213 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 MS4A4AQ96JQ5 239 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 MYL10Q9BUA6 226 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 GPCPD1Q9NPB8 672 aa17.32■□□□□ 0.36
ACTB-213ENST00000493945 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
ACTB-213ENST00000493945 MYH6P13533 1939 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 PALM3A6NDB9 673 aaPredicted RBP17.31■□□□□ 0.36
ACTB-213ENST00000493945 ZBED4O75132 1171 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 SYDE2Q5VT97 1194 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 BRI3BPQ8WY22 251 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 WASF1Q92558 559 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms