RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 USP49Q70CQ1 688 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 SH3RF3Q8TEJ3 882 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 DPF2Q92785 391 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 BAG1Q99933 345 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 L2HGDHQ9H9P8 463 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 PRPHP41219 470 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 AFMP43652 599 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 FMR1Q06787 632 aaKnown RBP eCLIP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 NCBP1Q09161 790 aaKnown RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 SLC27A3Q5K4L6 730 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 DTHD1Q6ZMT9 781 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 CCDC51Q96ER9 411 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 GJD4Q96KN9 370 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-209ENST00000493732 PANX2Q96RD6 677 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 SPZ1Q9BXG8 430 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 CUEDC2Q9H467 287 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 MAGEF1Q9HAY2 307 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 IL17RBQ9NRM6 502 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 SUGT1Q9Y2Z0 365 aa10.94□□□□□ -0.66
NPHP3-209ENST00000493732 PALM3A6NDB9 673 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-209ENST00000493732 GNA11P29992 359 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 MCM7P33993 719 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 CUL4BQ13620 913 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 E2F4Q16254 413 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 PRR5LQ6MZQ0 368 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 C16orf86Q6ZW13 317 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 PPFIBP1Q86W92 1011 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 TGFBRAP1Q8WUH2 860 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 AK8Q96MA6 479 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 RTFDC1Q9BY42 306 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-209ENST00000493732 CD209Q9NNX6 404 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 MAD2L2Q9UI95 211 aa10.93□□□□□ -0.66
NPHP3-209ENST00000493732 ITIH6Q6UXX5 1313 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 AKR1B15C9JRZ8 316 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 UFL1O94874 794 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 HOXA10P31260 410 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 PPP1R2P41236 205 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 TRIM14Q14142 442 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 CDKAL1Q5VV42 579 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 KRT25Q7Z3Z0 450 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 GRAMD1CQ8IYS0 662 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 TSC1Q92574 1164 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 CCDC47Q96A33 483 aaKnown RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 CRAMP1Q96RY5 1269 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 C6orf50Q9HD87 102 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 RWDD2AQ9UIY3 292 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 A0A087X0B3 334 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 PARP1P09874 1014 aaKnown RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 RASA1P20936 1047 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 HOXA7P31268 230 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 STAT6P42226 847 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 BTDP43251 543 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 STIM1Q13586 685 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 ZNF827Q17R98 1081 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 ZNF658Q5TYW1 1059 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 PDXDC2PQ6P474 469 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 SYT10Q6XYQ8 523 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 CNGA4Q8IV77 575 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 TEX11Q8IYF3 940 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 CCDC24Q8N4L8 307 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 CCSER1Q9C0I3 900 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 SAMSN1Q9NSI8 373 aaKnown RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 INTS13Q9NVM9 706 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 SEC63Q9UGP8 760 aaKnown RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 STX8Q9UNK0 236 aa10.92□□□□□ -0.66
NPHP3-209ENST00000493732 TNRC6CQ9HCJ0 1690 aaKnown RBP10.92□□□□□ -0.66
NPHP3-209ENST00000493732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.91□□□□□ -0.66
NPHP3-209ENST00000493732 LRRC10BA6NIK2 292 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 PPP1R3GB7ZBB8 358 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 TMEM232C9JQI7 657 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 M0R2N6 131 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 SERPINB2P05120 415 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 UBA7P41226 1012 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 CDK8P49336 464 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 GPSM2P81274 684 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 KCNB1Q14721 858 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 DIXDC1Q155Q3 683 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 SOGA3Q5TF21 947 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 SMIM5Q71RC9 77 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
NPHP3-209ENST00000493732 C4orf32Q8N8J7 132 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 TC2NQ8N9U0 490 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 ZNF397Q8NF99 534 aaPredicted RBP10.91□□□□□ -0.66
NPHP3-209ENST00000493732 RRP36Q96EU6 259 aaKnown RBP10.91□□□□□ -0.66
NPHP3-209ENST00000493732 EYA3Q99504 573 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 TMEM47Q9BQJ4 181 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 ZMYND12Q9H0C1 365 aa10.91□□□□□ -0.66
NPHP3-209ENST00000493732 ADD3Q9UEY8 706 aaKnown RBP10.91□□□□□ -0.66
NPHP3-209ENST00000493732 ZNF215Q9UL58 517 aaPredicted RBP10.91□□□□□ -0.66
NPHP3-209ENST00000493732 PPP2R2CQ9Y2T4 447 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms