RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 RFX7Q2KHR2 1363 aa14.6□□□□□ -0.07
UPF3A-210ENST00000493727 CCL5P13501 91 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 GSPT1P15170 499 aaKnown RBP14.59□□□□□ -0.07
UPF3A-210ENST00000493727 MCAMP43121 646 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 BTDP43251 543 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 BMP2KLQ5H9B9 411 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 PLA2G2CQ5R387 149 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 FASTKD5Q7L8L6 764 aaKnown RBP14.59□□□□□ -0.07
UPF3A-210ENST00000493727 SCYL3Q8IZE3 742 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 RAET1EQ8TD07 263 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 EMID1Q96A84 441 aaPredicted RBP14.59□□□□□ -0.07
UPF3A-210ENST00000493727 PARK7Q99497 189 aaKnown RBP14.59□□□□□ -0.07
UPF3A-210ENST00000493727 HAUS7Q99871 368 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 SNRKQ9NRH2 765 aa14.59□□□□□ -0.07
UPF3A-210ENST00000493727 GPR75-ASB3A0A0A6YYF3 556 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 PHF20L1A8MW92 1017 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 GOLIM4O00461 696 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 ZAP70P43403 619 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 MAP3K10Q02779 954 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 MECOMQ03112 1051 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 PRKCZQ05513 592 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 GPAT2Q6NUI2 795 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 SPATA5Q8NB90 893 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 DPF3Q92784 378 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 PAG1Q9NWQ8 432 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.08
UPF3A-210ENST00000493727 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
UPF3A-210ENST00000493727 CTNND1O60716 968 aaKnown RBP14.57□□□□□ -0.08
UPF3A-210ENST00000493727 RFC5P40937 340 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 TMEM132AQ24JP5 1023 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 PI16Q6UXB8 463 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 ZFPM1Q8IX07 1006 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 EVI5LQ96CN4 794 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 FSD1Q9BTV5 496 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 HTATIP2Q9BUP3 242 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 RNF208Q9H0X6 261 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 HMG20BQ9P0W2 317 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 MAST2Q6P0Q8 1798 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
UPF3A-210ENST00000493727 A0A0G2JLL6 359 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 DDTLA6NHG4 134 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 IGSF3O75054 1194 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 RGS20O76081 388 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 CYP2C8P10632 490 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 PTPRAP18433 802 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 SDSP20132 328 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 FCGRTP55899 365 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 RHBDL3P58872 404 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 PICALMQ13492 652 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 TTF1Q15361 905 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 LYPD8Q6UX82 237 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 PRRT2Q7Z6L0 340 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 U2AF1L4Q8WU68 220 aaKnown RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 NSUN4Q96CB9 384 aaKnown RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 NOL10Q9BSC4 688 aaKnown RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 DDX4Q9NQI0 724 aaKnown RBP14.56□□□□□ -0.08
UPF3A-210ENST00000493727 GABRQQ9UN88 632 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 SLC45A1Q9Y2W3 748 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 ZHX2Q9Y6X8 837 aa14.56□□□□□ -0.08
UPF3A-210ENST00000493727 FARP2O94887 1054 aaPredicted RBP14.55□□□□□ -0.08
UPF3A-210ENST00000493727 UBXN2AP68543 259 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 PTPRNQ16849 979 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 CASC1Q6TDU7 716 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 SH3BP5LQ7L8J4 393 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
UPF3A-210ENST00000493727 UNC93B1Q9H1C4 597 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 RAI14Q9P0K7 980 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 LRP2BPQ9P2M1 347 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 AFG3L2Q9Y4W6 797 aa14.55□□□□□ -0.08
UPF3A-210ENST00000493727 UNC80Q8N2C7 3258 aa14.54□□□□□ -0.08
UPF3A-210ENST00000493727 A0A1W2PPC1 479 aa14.54□□□□□ -0.08
UPF3A-210ENST00000493727 LRRFIP1Q32MZ4 808 aaKnown RBP14.54□□□□□ -0.08
UPF3A-210ENST00000493727 OSBPL5Q9H0X9 879 aaPredicted RBP14.54□□□□□ -0.08
UPF3A-210ENST00000493727 LOC285556D6RIA3 1793 aa14.54□□□□□ -0.08
UPF3A-210ENST00000493727 CDK5RAP2Q96SN8 1893 aa14.54□□□□□ -0.08
UPF3A-210ENST00000493727 MYO5AQ9Y4I1 1855 aaKnown RBP14.53□□□□□ -0.08
UPF3A-210ENST00000493727 FOCADQ5VW36 1801 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 CDC45O75419 566 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 IDH1O75874 414 aaKnown RBP14.53□□□□□ -0.08
UPF3A-210ENST00000493727 SGPL1O95470 568 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 BAG3O95817 575 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 CYP2E1P05181 493 aaPredicted RBP14.53□□□□□ -0.08
UPF3A-210ENST00000493727 GADL1Q6ZQY3 521 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 KBTBD3Q8NAB2 608 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 ZNF384Q8TF68 577 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 NUDT12Q9BQG2 462 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.53□□□□□ -0.08
UPF3A-210ENST00000493727 ANTXR1Q9H6X2 564 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■■□□ 14.9
UPF3A-210ENST00000493727 DIAPH3Q9NSV4 1193 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 NR2E3Q9Y5X4 410 aa14.53□□□□□ -0.08
UPF3A-210ENST00000493727 HIP1O00291 1037 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 SOX1O00570 391 aaPredicted RBP14.52□□□□□ -0.09
UPF3A-210ENST00000493727 ADCY3O60266 1144 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 INHAP05111 366 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 FLT3LGP49771 235 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 MAP3K12Q12852 859 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 IRF5Q13568 498 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 LIAT1Q6ZQX7 453 aa14.52□□□□□ -0.09
UPF3A-210ENST00000493727 TBC1D9Q6ZT07 1266 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms