RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 CHRDL2Q6WN34 429 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 MICALL2Q8IY33 904 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 ZNF654Q8IZM8 581 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 STK11IPQ8N1F8 1099 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 NSUN7Q8NE18 718 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 ZNF397Q8NF99 534 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 MAP3K14Q99558 947 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 CNTNAP1P78357 1384 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 CCDC196A0A1B0GTZ2 297 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 GOLGA8AA7E2F4 631 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 H7C1D1 291 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 WNT10BO00744 389 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 GRIN3BO60391 1043 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 TNFAIP1Q13829 316 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 TTC31Q49AM3 519 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 CATIPQ7Z7H3 387 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 STK36Q9NRP7 1315 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 HERC5Q9UII4 1024 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 CNOT7Q9UIV1 285 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 GJA3Q9Y6H8 435 aa8.29□□□□□ -1.08
SMARCE1-211ENST00000493660 WDR33Q9C0J8 1336 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 SHMT1P34896 483 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 SLC4A8Q2Y0W8 1093 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 SH3BP5LQ7L8J4 393 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 CRACR2BQ8N4Y2 399 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 SLC44A5Q8NCS7 719 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 CALR3Q96L12 384 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 DRC1Q96MC2 740 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 ZKSCAN3Q9BRR0 538 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 GPRC5DQ9NZD1 345 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 RNF181Q9P0P0 153 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 IGKV6D-41A0A0C4DH26 115 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 PTPDC1A2A3K4 754 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 DDTLA6NHG4 134 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 TBC1D12O60347 775 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 CTDNEP1O95476 244 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 BRD1O95696 1058 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 TPM3P06753 285 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 CACNB3P54284 484 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 CCT2P78371 535 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 TCP10Q12799 353 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 RTN1Q16799 776 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 DNAJC21Q5F1R6 531 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 TEX35Q5T0J7 233 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 TATDN1Q6P1N9 297 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 ZFPM1Q8IX07 1006 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 C10orf67Q8IYJ2 551 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 SENP2Q9HC62 589 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 IL17RBQ9NRM6 502 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 ZNF446Q9NWS9 450 aa8.28□□□□□ -1.08
SMARCE1-211ENST00000493660 WDR90Q96KV7 1748 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 CLRN2A0PK11 232 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 SMTNL1A8MU46 457 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 TCP10L2B9ZVM9 353 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 CPLX1O14810 134 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 SYT10Q6XYQ8 523 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 MICU3Q86XE3 530 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 APOBEC3FQ8IUX4 373 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 KAT14Q9H8E8 782 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 MPHOSPH10O00566 681 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 STX6O43752 255 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 BAG4O95429 457 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 TOP1P11387 765 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 IFNAR1P17181 557 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 SYT1P21579 422 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 TROAPQ12815 778 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 UVSSAQ2YD98 709 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 C9orf131Q5VYM1 1079 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 MCTP2Q6DN12 878 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 FANCBQ8NB91 859 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 CSRNP1Q96S65 589 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 CEP89Q96ST8 783 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 DNAJC18Q9H819 358 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 VEZTQ9HBM0 779 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 FAM217BQ9NTX9 383 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 PGAP2Q9UHJ9 254 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 PAXBP1Q9Y5B6 917 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 PPP2R3BQ9Y5P8 575 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 DOCK1Q14185 1865 aa8.27□□□□□ -1.09
SMARCE1-211ENST00000493660 SHTN1A0MZ66 631 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 JAK2O60674 1132 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 AKR1B1P15121 316 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 LMOD1P29536 600 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 KIF5BP33176 963 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 GNAQP50148 359 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 GYS2P54840 703 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 NTRK3Q16288 839 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 GPR162Q16538 588 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 LARP1BQ659C4 914 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 HOOK2Q96ED9 719 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 BORCS6Q96GS4 357 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms