RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 PLA2G6O60733 806 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 PDHBP11177 359 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 BMP3P12645 472 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
LSM2-214ENST00000493387 GRM4Q14833 912 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 CCL15Q16663 113 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 CYP4F22Q6NT55 531 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 GADL1Q6ZQY3 521 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 CHURC1Q8WUH1 139 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 NUP133Q8WUM0 1156 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 ZCCHC17Q9NP64 241 aaKnown RBP13.48□□□□□ -0.25
LSM2-214ENST00000493387 SH2B1Q9NRF2 756 aaPredicted RBP13.48□□□□□ -0.25
LSM2-214ENST00000493387 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
LSM2-214ENST00000493387 FEM1BQ9UK73 627 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 BRPF3Q9ULD4 1205 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 AGTPBP1Q9UPW5 1226 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
LSM2-214ENST00000493387 MYH4Q9Y623 1939 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 GOLGA8BA8MQT2 603 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 DHX16O60231 1041 aaKnown RBP13.47□□□□□ -0.25
LSM2-214ENST00000493387 VCAM1P19320 739 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 OSBPP22059 807 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 PDIA3P30101 505 aaKnown RBP13.47□□□□□ -0.25
LSM2-214ENST00000493387 HOXA7P31268 230 aaPredicted RBP13.47□□□□□ -0.25
LSM2-214ENST00000493387 MAP2K2P36507 400 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 ZNF543Q08ER8 600 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 CCDC96Q2M329 555 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 FAM160B2Q86V87 743 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 MICU3Q86XE3 530 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 SPICE1Q8N0Z3 855 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 BRI3BPQ8WY22 251 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 SNX21Q969T3 373 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 SLKQ9H2G2 1235 aaPredicted RBP13.47□□□□□ -0.25
LSM2-214ENST00000493387 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 MTMR7Q9Y216 660 aa13.47□□□□□ -0.25
LSM2-214ENST00000493387 WDR33Q9C0J8 1336 aaKnown RBP13.46□□□□□ -0.25
LSM2-214ENST00000493387 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
LSM2-214ENST00000493387 GOLGA8AA7E2F4 631 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 SMARCA1P28370 1054 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 TM4SF4P48230 202 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 METAP2P50579 478 aaKnown RBP eCLIP13.46□□□□□ -0.25
LSM2-214ENST00000493387 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
LSM2-214ENST00000493387 GRM1Q13255 1194 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 MOGSQ13724 837 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 RTN1Q16799 776 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 KIAA1755Q5JYT7 1200 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 FAM83BQ5T0W9 1011 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 CPLX2Q6PUV4 134 aaKnown RBP13.46□□□□□ -0.25
LSM2-214ENST00000493387 CATSPERGQ6ZRH7 1159 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 TANGO6Q9C0B7 1094 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
LSM2-214ENST00000493387 HOXC10Q9NYD6 342 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 TPCN1Q9ULQ1 816 aa13.46□□□□□ -0.25
LSM2-214ENST00000493387 ISY1Q9ULR0 285 aaKnown RBP13.46□□□□□ -0.25
LSM2-214ENST00000493387 NID2Q14112 1375 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 MYPNQ86TC9 1320 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 PFKFB2O60825 505 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 ALDH1A1P00352 501 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 FDX1P10109 184 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 VEGFBP49765 207 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 STAT2P52630 851 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 IRX3P78415 501 aaPredicted RBP13.45□□□□□ -0.26
LSM2-214ENST00000493387 COG2Q14746 738 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 GPAT2Q6NUI2 795 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 BTNL9Q6UXG8 535 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 GTF3C2Q8WUA4 911 aaPredicted RBP13.45□□□□□ -0.26
LSM2-214ENST00000493387 MYL10Q9BUA6 226 aa13.45□□□□□ -0.26
LSM2-214ENST00000493387 BTBD19C9JJ37 291 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 FLOT1O75955 427 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 IKQ13123 557 aaPredicted RBP13.44□□□□□ -0.26
LSM2-214ENST00000493387 TREML2Q5T2D2 321 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 KCTD1Q719H9 257 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 NOL8Q76FK4 1167 aaKnown RBP13.44□□□□□ -0.26
LSM2-214ENST00000493387 HSCBQ8IWL3 235 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 PRPF38AQ8NAV1 312 aaKnown RBP13.44□□□□□ -0.26
LSM2-214ENST00000493387 NUP88Q99567 741 aaPredicted RBP13.44□□□□□ -0.26
LSM2-214ENST00000493387 SLF1Q9BQI6 1058 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
LSM2-214ENST00000493387 GPCPD1Q9NPB8 672 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
LSM2-214ENST00000493387 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
LSM2-214ENST00000493387 PTPRFP10586 1907 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 PDHXO00330 501 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 CPLX1O14810 134 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 CDKL5O76039 1030 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 RXRAP19793 462 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 HTRA3P83110 453 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms