RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
SYCP1-208ENST00000493377 CEP128Q6ZU80 1094 aa6.29□□□□□ -1.4
SYCP1-208ENST00000493377 PCSK5Q92824 1860 aa6.29□□□□□ -1.4
SYCP1-208ENST00000493377 ST6GALNAC2Q9UJ37 374 aa6.29□□□□□ -1.4
SYCP1-208ENST00000493377 RAB3GAP1Q15042 981 aa6.28□□□□□ -1.4
SYCP1-208ENST00000493377 MAP6Q96JE9 813 aa6.28□□□□□ -1.4
SYCP1-208ENST00000493377 PLA2G1BP04054 148 aaKnown RBP6.27□□□□□ -1.41
SYCP1-208ENST00000493377 LMO1P25800 156 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 HTRA3P83110 453 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 FHL2Q14192 279 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 CARFQ8N187 725 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 DNAJB8Q8NHS0 232 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 ZNF526Q8TF50 670 aaPredicted RBP6.27□□□□□ -1.41
SYCP1-208ENST00000493377 PLPPR2Q96GM1 343 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 PRDM14Q9GZV8 571 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 PMF1-BGLAPU3KQ54 211 aa6.27□□□□□ -1.41
SYCP1-208ENST00000493377 CBX2Q14781 532 aaPredicted RBP6.26□□□□□ -1.41
SYCP1-208ENST00000493377 TARBP2Q15633 366 aaKnown RBP6.26□□□□□ -1.41
SYCP1-208ENST00000493377 ZMYM5Q9UJ78 669 aa6.26□□□□□ -1.41
SYCP1-208ENST00000493377 RBM47A0AV96 593 aaKnown RBP6.25□□□□□ -1.41
SYCP1-208ENST00000493377 NANOS3P60323 173 aaKnown RBP6.25□□□□□ -1.41
SYCP1-208ENST00000493377 LAPTM5Q13571 262 aa6.25□□□□□ -1.41
SYCP1-208ENST00000493377 SSBP3Q9BWW4 388 aaPredicted RBP6.25□□□□□ -1.41
SYCP1-208ENST00000493377 AKAP2Q9Y2D5 859 aa6.25□□□□□ -1.41
SYCP1-208ENST00000493377 TACC3Q9Y6A5 838 aa6.25□□□□□ -1.41
SYCP1-208ENST00000493377 SNCAIPQ9Y6H5 919 aa6.25□□□□□ -1.41
SYCP1-208ENST00000493377 MVKQ03426 396 aa6.24□□□□□ -1.41
SYCP1-208ENST00000493377 RNF111Q6ZNA4 994 aa6.24□□□□□ -1.41
SYCP1-208ENST00000493377 MRPL41Q8IXM3 137 aaKnown RBP6.24□□□□□ -1.41
SYCP1-208ENST00000493377 PLCD4Q9BRC7 762 aa6.24□□□□□ -1.41
SYCP1-208ENST00000493377 CEP131Q9UPN4 1083 aa6.24□□□□□ -1.41
SYCP1-208ENST00000493377 RPL10P27635 214 aaKnown RBP6.23□□□□□ -1.41
SYCP1-208ENST00000493377 SRPK2P78362 688 aaKnown RBP6.23□□□□□ -1.41
SYCP1-208ENST00000493377 FKBP4Q02790 459 aaKnown RBP eCLIP6.23□□□□□ -1.41
SYCP1-208ENST00000493377 DLX2Q07687 328 aaPredicted RBP6.23□□□□□ -1.41
SYCP1-208ENST00000493377 CHFRQ96EP1 664 aa6.23□□□□□ -1.41
SYCP1-208ENST00000493377 DLL4Q9NR61 685 aa6.23□□□□□ -1.41
SYCP1-208ENST00000493377 NUDT19A8MXV4 375 aa6.22□□□□□ -1.41
SYCP1-208ENST00000493377 FOXO4P98177 505 aa6.22□□□□□ -1.41
SYCP1-208ENST00000493377 HHIPL1Q96JK4 782 aa6.22□□□□□ -1.41
SYCP1-208ENST00000493377 KLC2Q9H0B6 622 aa6.22□□□□□ -1.41
SYCP1-208ENST00000493377 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
SYCP1-208ENST00000493377 EIF1AYO14602 144 aaKnown RBP6.21□□□□□ -1.42
SYCP1-208ENST00000493377 ENC1O14682 589 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 GRK4P32298 578 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 RTP1P59025 263 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 CSRP2Q16527 193 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 PLEKHN1Q494U1 663 aaPredicted RBP6.21□□□□□ -1.42
SYCP1-208ENST00000493377 GALNT18Q6P9A2 607 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 GLB1LQ6UWU2 654 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 RPTNQ6XPR3 784 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 WAPLQ7Z5K2 1190 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 DPH2Q9BQC3 489 aaPredicted RBP6.21□□□□□ -1.42
SYCP1-208ENST00000493377 CEP44Q9C0F1 390 aa6.21□□□□□ -1.42
SYCP1-208ENST00000493377 KRTAP29-1A8MX34 341 aaPredicted RBP6.2□□□□□ -1.42
SYCP1-208ENST00000493377 PPFIA2O75334 1257 aa6.2□□□□□ -1.42
SYCP1-208ENST00000493377 PAGE1O75459 146 aa6.2□□□□□ -1.42
SYCP1-208ENST00000493377 ZNF200P98182 395 aaPredicted RBP6.2□□□□□ -1.42
SYCP1-208ENST00000493377 PDE3BQ13370 1112 aa6.2□□□□□ -1.42
SYCP1-208ENST00000493377 ZC3H14Q6PJT7 736 aaKnown RBP6.2□□□□□ -1.42
SYCP1-208ENST00000493377 EPS8L3Q8TE67 593 aaKnown RBP6.2□□□□□ -1.42
SYCP1-208ENST00000493377 TNFRSF12AQ9NP84 129 aa6.2□□□□□ -1.42
SYCP1-208ENST00000493377 MAPKAPK2P49137 400 aa6.19□□□□□ -1.42
SYCP1-208ENST00000493377 WIPI1Q5MNZ9 446 aaPredicted RBP6.19□□□□□ -1.42
SYCP1-208ENST00000493377 SLC6A19Q695T7 634 aa6.19□□□□□ -1.42
SYCP1-208ENST00000493377 ZNF761Q86XN6 746 aaPredicted RBP6.19□□□□□ -1.42
SYCP1-208ENST00000493377 BCANQ96GW7 911 aa6.19□□□□□ -1.42
SYCP1-208ENST00000493377 BRPF3Q9ULD4 1205 aa6.19□□□□□ -1.42
SYCP1-208ENST00000493377 TAF6LQ9Y6J9 622 aa6.19□□□□□ -1.42
SYCP1-208ENST00000493377 RASIP1Q5U651 963 aa6.18□□□□□ -1.42
SYCP1-208ENST00000493377 RNF141Q8WVD5 230 aa6.18□□□□□ -1.42
SYCP1-208ENST00000493377 VOPP1Q96AW1 172 aa6.18□□□□□ -1.42
SYCP1-208ENST00000493377 CEP89Q96ST8 783 aa6.18□□□□□ -1.42
SYCP1-208ENST00000493377 TJP2Q9UDY2 1190 aa6.18□□□□□ -1.42
SYCP1-208ENST00000493377 NR1I3Q14994 352 aa6.17□□□□□ -1.42
SYCP1-208ENST00000493377 CLEC16AQ2KHT3 1053 aa6.17□□□□□ -1.42
SYCP1-208ENST00000493377 DNAJC10Q8IXB1 793 aa6.17□□□□□ -1.42
SYCP1-208ENST00000493377 TMEM87BQ96K49 555 aa6.17□□□□□ -1.42
SYCP1-208ENST00000493377 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.16□□□□□ -1.42
SYCP1-208ENST00000493377 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
SYCP1-208ENST00000493377 WTIPA6NIX2 430 aaPredicted RBP6.16□□□□□ -1.42
SYCP1-208ENST00000493377 SCUBE1Q8IWY4 988 aa6.16□□□□□ -1.42
SYCP1-208ENST00000493377 FAM129BQ96TA1 746 aa6.16□□□□□ -1.42
SYCP1-208ENST00000493377 BCO2Q9BYV7 579 aa6.16□□□□□ -1.42
SYCP1-208ENST00000493377 NLRP2Q9NX02 1062 aa6.16□□□□□ -1.42
SYCP1-208ENST00000493377 MTMR7Q9Y216 660 aa6.16□□□□□ -1.42
SYCP1-208ENST00000493377 FAN1Q9Y2M0 1017 aa6.16□□□□□ -1.42
SYCP1-208ENST00000493377 SARSP49591 514 aaKnown RBP6.15□□□□□ -1.42
SYCP1-208ENST00000493377 CYP4F8P98187 520 aa6.15□□□□□ -1.42
SYCP1-208ENST00000493377 PTPN11Q06124 597 aaPredicted RBP6.15□□□□□ -1.42
SYCP1-208ENST00000493377 HSF5Q4G112 596 aaPredicted RBP6.15□□□□□ -1.42
SYCP1-208ENST00000493377 KRTAP5-11Q6L8G4 156 aa6.15□□□□□ -1.42
SYCP1-208ENST00000493377 TPTE2Q6XPS3 522 aa6.15□□□□□ -1.42
SYCP1-208ENST00000493377 LGI4Q8N135 537 aa6.15□□□□□ -1.42
SYCP1-208ENST00000493377 RNF38Q9H0F5 515 aa6.15□□□□□ -1.42
SYCP1-208ENST00000493377 NTMQ9P121 344 aa6.15□□□□□ -1.42
SYCP1-208ENST00000493377 ENOX1Q8TC92 643 aaKnown RBP6.14□□□□□ -1.43
SYCP1-208ENST00000493377 EAF1Q96JC9 268 aaPredicted RBP6.14□□□□□ -1.43
SYCP1-208ENST00000493377 TNFRSF10DQ9UBN6 386 aa6.14□□□□□ -1.43
SYCP1-208ENST00000493377 ZNF536O15090 1300 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms