RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 ZNF513Q8N8E2 541 aaPredicted RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 FAM13CQ8NE31 585 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 TTC9Q92623 222 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 OSBP2Q969R2 916 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 WDR89Q96FK6 387 aaPredicted RBP6.8□□□□□ -1.32
SND1-216ENST00000492840 DHRS1Q96LJ7 313 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 CDH19Q9H159 772 aa6.8□□□□□ -1.32
SND1-216ENST00000492840 C2CD2LO14523 706 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 PRODHO43272 600 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 NPTXRO95502 500 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 TP53P04637 393 aaPredicted RBP6.79□□□□□ -1.32
SND1-216ENST00000492840 LIG1P18858 919 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 ITGA6P23229 1130 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 GRIA2P42262 883 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 HNRNPUQ00839 825 aaKnown RBP eCLIP6.79□□□□□ -1.32
SND1-216ENST00000492840 ITKQ08881 620 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 HLTFQ14527 1009 aaKnown RBP eCLIP6.79□□□□□ -1.322e-6■■□□□ 13.7
SND1-216ENST00000492840 PCBP1Q15365 356 aaKnown RBP eCLIP6.79□□□□□ -1.326e-11■□□□□ 10.9
SND1-216ENST00000492840 SEPT7Q16181 437 aaKnown RBP6.79□□□□□ -1.32
SND1-216ENST00000492840 HEATR6Q6AI08 1181 aaKnown RBP6.79□□□□□ -1.32
SND1-216ENST00000492840 PSAPL1Q6NUJ1 521 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 NSMFQ6X4W1 530 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 BRAPQ7Z569 592 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 SLFN12Q8IYM2 578 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 LRRN4CLQ8ND94 238 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 SLC7A14Q8TBB6 771 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 WNT8BQ93098 351 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 PPP1R14AQ96A00 147 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 MDFIQ99750 246 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 LGR4Q9BXB1 951 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 RTFDC1Q9BY42 306 aaPredicted RBP6.79□□□□□ -1.32
SND1-216ENST00000492840 WNT10AQ9GZT5 417 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 KLHL25Q9H0H3 589 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 LRRC4BQ9NT99 713 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 CSADQ9Y600 493 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 COMMD10Q9Y6G5 202 aa6.79□□□□□ -1.32
SND1-216ENST00000492840 E2F8A0AVK6 867 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 ADARB2-AS1A8MUL3 147 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 C9IYK1 514 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 RGS13O14921 159 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 CBFA2T2O43439 604 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 UBOX5O94941 541 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 MYL1P05976 194 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 ARL4DP49703 201 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 YARSP54577 528 aaKnown RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 ETF1P62495 437 aaKnown RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 RING1Q06587 406 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 HDAC1Q13547 482 aaPredicted RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 ZNF460Q14592 562 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 ZC3H12AQ5D1E8 599 aaKnown RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 TXNDC11Q6PKC3 985 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 SPATS2Q86XZ4 545 aaKnown RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 MCATQ8IVS2 390 aaKnown RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 PHACTR4Q8IZ21 702 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 GSTCDQ8NEC7 633 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 TTC8Q8TAM2 541 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 SMARCC1Q92922 1105 aaPredicted RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 HOOK2Q96ED9 719 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 CCDC8Q9H0W5 538 aaPredicted RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 SLC52A2Q9HAB3 445 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 AVENQ9NQS1 362 aaPredicted RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 TJP2Q9UDY2 1190 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 NDOR1Q9UHB4 597 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 PCDHGC5Q9Y5F6 944 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 TNPO3Q9Y5L0 923 aaKnown RBP6.78□□□□□ -1.32
SND1-216ENST00000492840 CARMIL1Q5VZK9 1371 aa6.78□□□□□ -1.32
SND1-216ENST00000492840 ZNF335Q9H4Z2 1342 aaPredicted RBP6.77□□□□□ -1.32
SND1-216ENST00000492840 GPR25O00155 361 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 TBX1O43435 398 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 BRINP1O60477 761 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 BMP4P12644 408 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 NEK4P51957 841 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 GRIK5Q16478 980 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 C4orf46Q504U0 113 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 SYCP2LQ5T4T6 812 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 FGD2Q7Z6J4 655 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 CHMP4CQ96CF2 233 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 TMEM87BQ96K49 555 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 FGD4Q96M96 766 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 YIPF4Q9BSR8 244 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 TRIM8Q9BZR9 551 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 MTFR1LQ9H019 292 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 OSGEPQ9NPF4 335 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 CHST12Q9NRB3 414 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 AASDHPPTQ9NRN7 309 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 KLF15Q9UIH9 416 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 PDZRN3Q9UPQ7 1066 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 HIF3AQ9Y2N7 669 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 C3P01024 1663 aa6.77□□□□□ -1.33
SND1-216ENST00000492840 C9orf84Q5VXU9 1444 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 CAMSAP1Q5T5Y3 1602 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 HECW1Q76N89 1606 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 LINC01387J3KSC0 135 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 OPA1O60313 960 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 KPNA6O60684 536 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 ASLP04424 464 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 BAG6P46379 1132 aa6.76□□□□□ -1.33
SND1-216ENST00000492840 CEBPAP49715 358 aaPredicted RBP6.76□□□□□ -1.33
SND1-216ENST00000492840 OS9Q13438 667 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms