RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 FANCGO15287 622 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KIF5BP33176 963 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 ST5P78524 1137 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 STIM1Q13586 685 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CCDC122Q5T0U0 273 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 GJA10Q969M2 543 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 MED15Q96RN5 788 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 B4DLN1 442 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 ZNHIT6Q9NWK9 470 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CAMTA2O94983 1202 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 LDHBP07195 334 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 FAM207AQ9NSI2 230 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 MORC2Q9Y6X9 1032 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PDE4DQ08499 809 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PKN1Q16512 942 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 DCP1AQ9NPI6 582 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 ERVV-1B6SEH8 477 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TADA3O75528 432 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 RPN1P04843 607 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PRCPP42785 496 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
TNFRSF1B-203ENST00000492361 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CTAGE15A4D2H0 777 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CTAGE8P0CG41 777 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CTAGE6Q86UF2 777 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CTAGE4Q8IX94 777 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 BLIDQ8IZY5 108 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PDE11AQ9HCR9 933 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TCP11L1Q9NUJ3 509 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CCDC66A2RUB6 948 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TNNI2P48788 182 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KLK7P49862 253 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 COPB1P53618 953 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 ALX1Q15699 326 aa17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 GSPT2Q8IYD1 628 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CCDC47Q96A33 483 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-203ENST00000492361 MYO1BO43795 1136 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 GPS2Q13227 327 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 LRRC41Q15345 812 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TMTC3Q6ZXV5 915 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 GOLGA6L1Q8N7Z2 621 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 SH3RF3Q8TEJ3 882 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 SLIT3O75094 1523 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 EFCAB8A8MWE9 144 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 RNF225M0QZC1 329 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TDRD12Q587J7 1177 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 LRRC47Q8N1G4 583 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TMEM60Q9H2L4 133 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 EXOC1Q9NV70 894 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 ADGRG1Q9Y653 693 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
TNFRSF1B-203ENST00000492361 VGLL3A8MV65 326 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 NTSR2O95665 410 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CXCR5P32302 372 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 RFC4P35249 363 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 MDM2Q00987 491 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TROAPQ12815 778 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CNGA4Q8IV77 575 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CTAGE1Q96RT6 745 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 GOLGA6L9A6NEM1 432 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PSMA7O14818 248 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 NR1I3Q14994 352 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 LONRF2Q1L5Z9 754 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 ZSCAN29Q8IWY8 852 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 FERMT2Q96AC1 680 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CRACR2AQ9BSW2 395 aa17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KLRF2D3W0D1 207 aa17.08■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.33
TNFRSF1B-203ENST00000492361 PLA2G4AP47712 749 aa17.08■□□□□ 0.33
TNFRSF1B-203ENST00000492361 L2HGDHQ9H9P8 463 aa17.08■□□□□ 0.33
TNFRSF1B-203ENST00000492361 FHOD1Q9Y613 1164 aa17.08■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KIF20AO95235 890 aa17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 GYPCP04921 128 aa17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 PARP1P09874 1014 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 RBM5P52756 815 aaKnown RBP eCLIP17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 GABPB1Q06547 395 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 MFAP3LO75121 409 aa17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 KRT18P05783 430 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 SEC23AQ15436 765 aa17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 COA7Q96BR5 231 aa17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
TNFRSF1B-203ENST00000492361 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1B-203ENST00000492361 XDHP47989 1333 aa17.07■□□□□ 0.32
TNFRSF1B-203ENST00000492361 FAM205AQ6ZU69 1335 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms