RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 SGMS1Q86VZ5 419 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 PROCA1Q8NCQ7 364 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 LPAR1Q92633 364 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 TANGO6Q9C0B7 1094 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 CPVLQ9H3G5 476 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 AGTPBP1Q9UPW5 1226 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 COL11A1P12107 1806 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-227ENST00000491104 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 PDHXO00330 501 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 DDAH1O94760 285 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 LARGE1O95461 756 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 BMP3P12645 472 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 TROAPQ12815 778 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 STK3Q13188 491 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 GRM4Q14833 912 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 FASTKD5Q7L8L6 764 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 STAG2Q8N3U4 1231 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 DCAF4Q8WV16 495 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 FBXO28Q9NVF7 368 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 TPCN1Q9ULQ1 816 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 SYNPO2Q9UMS6 1093 aa12.58□□□□□ -0.4
CACNA1C-227ENST00000491104 GOLGA8AA7E2F4 631 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 TMEM232C9JQI7 657 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 ZBTB43O43298 467 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 PARP1P09874 1014 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 CYP2C8P10632 490 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 SLC16A2P36021 539 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 ZNF543Q08ER8 600 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 CATSPERGQ6ZRH7 1159 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 TMTC2Q8N394 836 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 MAD2L2Q9UI95 211 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 HPS5Q9UPZ3 1129 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 A0A0G2JMZ2 1700 aa12.57□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 PEX10O60683 326 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 DTNBO60941 627 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 FLOT1O75955 427 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 PLEKHA8P1O95397 391 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 CDC27P30260 824 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 TM4SF4P48230 202 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 SNAP25P60880 206 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 IKQ13123 557 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 CMTR1Q8N1G2 835 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 DNAJC5GQ8N7S2 189 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 P2RX7Q99572 595 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 ASCC2Q9H1I8 757 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 MYH6P13533 1939 aa12.56□□□□□ -0.4
CACNA1C-227ENST00000491104 BAZ2BQ9UIF8 2168 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 ST18O60284 1047 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 PPFIA3O75145 1194 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 OSBPP22059 807 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 PDIA3P30101 505 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 HOXA7P31268 230 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 MAP2K2P36507 400 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 EVCP57679 992 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 TAF1CQ15572 869 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 ME3Q16798 604 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 RTN1Q16799 776 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 SLC35G1Q2M3R5 365 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 POTEEQ6S8J3 1075 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 NECAB1Q8N987 351 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 CTCFLQ8NI51 663 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 KIFC2Q96AC6 838 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 ATG4CQ96DT6 458 aa12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 NCOA5Q9HCD5 579 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-227ENST00000491104 CALM1P0DP23 149 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 CALM2P0DP24 149 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 CALM3P0DP25 149 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 TAL1P17542 331 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 DSG3P32926 999 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 STAT2P52630 851 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 INHBEP58166 350 aa12.54□□□□□ -0.4
CACNA1C-227ENST00000491104 ST3GAL1Q11201 340 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms