RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 TRPC6Q9Y210 931 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 RPAP1Q9BWH6 1393 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 M0QZ92 97 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 SEPT2Q15019 361 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 PIGSQ96S52 555 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 FRMD4BQ9Y2L6 1034 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 TMCO5BA8MYB1 307 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 STYK1Q6J9G0 422 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 MYCT1Q8N699 235 aa16.13■□□□□ 0.17
ARHGEF39-205ENST00000490638 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 TTC14Q96N46 770 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 CNNM4Q6P4Q7 775 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 OTUD6AQ7L8S5 288 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 METTL13Q8N6R0 699 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 COA7Q96BR5 231 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 NT5C3AQ9H0P0 336 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 SUGT1Q9Y2Z0 365 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 COL5A2P05997 1499 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 ZNF202O95125 648 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 TECP42680 631 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 LIFRP42702 1097 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 TNNT3P45378 269 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 RTEL1Q9NZ71 1219 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 PNMA3Q9UL41 463 aa16.12■□□□□ 0.17
ARHGEF39-205ENST00000490638 SYDE2Q5VT97 1194 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 ESPNB1AK53 854 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 CETN3O15182 167 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 RASA3Q14644 834 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 FAM160B2Q86V87 743 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 SUGCTQ9HAC7 445 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 MYCP01106 439 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 CTNNA2P26232 953 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 PPP1R2P41236 205 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 NECTIN1Q15223 517 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 UVSSAQ2YD98 709 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 RASGRP4Q8TDF6 673 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 USP28Q96RU2 1077 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 CTNNBL1Q8WYA6 563 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF39-205ENST00000490638 MROH1Q8NDA8 1641 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 UBN2Q6ZU65 1347 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 OR52Z1P0C646 297 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 UTP14CQ5TAP6 766 aaKnown RBP16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 IQCEQ6IPM2 695 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 USP32Q8NFA0 1604 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 MROH2AA6NES4 1674 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 DDX25Q9UHL0 483 aaKnown RBP16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 PPLO60437 1756 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 UTYO14607 1347 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 USP17L5A8MUK1 530 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 SH2B2O14492 632 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 IFNAR1P17181 557 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 EXOC7Q9UPT5 735 aa16.1■□□□□ 0.17
ARHGEF39-205ENST00000490638 PTGS1P23219 599 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 TAF12Q16514 161 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 XKR9Q5GH70 373 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 PAFAH1B1P43034 410 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 URI1O94763 535 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 NEFHP12036 1026 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 NT5C2P49902 561 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 PTGDRQ13258 359 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 NSUN4Q96CB9 384 aaKnown RBP16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 ZHX1Q9UKY1 873 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 PLSCR1O15162 318 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 MYL5Q02045 173 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 TEKT3Q9BXF9 490 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 DAGLAQ9Y4D2 1042 aa16.09■□□□□ 0.17
ARHGEF39-205ENST00000490638 UBXN1Q04323 297 aa16.08■□□□□ 0.17
ARHGEF39-205ENST00000490638 KIF2AO00139 706 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 FMNL1O95466 1100 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 BRD1O95696 1058 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 SLFN12Q8IYM2 578 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 MRPL44Q9H9J2 332 aaKnown RBP16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 MTMR6Q9Y217 621 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 GCNT3O95395 438 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 ZSCAN30Q86W11 494 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 CDAN1Q8IWY9 1227 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 CSGALNACT2Q8N6G5 542 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 CYLC1P35663 651 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 NELFCDQ8IXH7 590 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 TMEM47Q9BQJ4 181 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 MXD3Q9BW11 206 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 KCNG1Q9UIX4 513 aa16.08■□□□□ 0.16
ARHGEF39-205ENST00000490638 GSG1L2A8MUP6 293 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 EXOC3O60645 756 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 GMPSP49915 693 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 SEPT14Q6ZU15 432 aa16.07■□□□□ 0.16
ARHGEF39-205ENST00000490638 DEPTORQ8TB45 409 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms