RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 PTPRNQ16849 979 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 SHROOM1Q2M3G4 852 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-217ENST00000490543 MYSM1Q5VVJ2 828 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-217ENST00000490543 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 ERICH6Q7L0X2 663 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.12□□□□□ -0.63
SRRM1-217ENST00000490543 FAM9BQ8IZU0 186 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 XAGE2Q96GT9 111 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 FAM161BQ96MY7 647 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 RBPJLQ9UBG7 517 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 LOC285556D6RIA3 1793 aa11.12□□□□□ -0.63
SRRM1-217ENST00000490543 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
SRRM1-217ENST00000490543 BACE1P56817 501 aa11.11□□□□□ -0.63
SRRM1-217ENST00000490543 DESI1Q6ICB0 168 aa11.11□□□□□ -0.63
SRRM1-217ENST00000490543 USP6NLQ92738 828 aa11.11□□□□□ -0.63
SRRM1-217ENST00000490543 NSUN4Q96CB9 384 aaKnown RBP11.11□□□□□ -0.63
SRRM1-217ENST00000490543 MRGPRX2Q96LB1 330 aa11.11□□□□□ -0.63
SRRM1-217ENST00000490543 PORCNQ9H237 461 aa11.11□□□□□ -0.63
SRRM1-217ENST00000490543 COPRSQ9NQ92 184 aa11.11□□□□□ -0.63
SRRM1-217ENST00000490543 PDS5AQ29RF7 1337 aaKnown RBP11.1□□□□□ -0.63
SRRM1-217ENST00000490543 A0A1B0GUL7 405 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 HOXA7P31268 230 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-217ENST00000490543 WNT7BP56706 349 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 HERVK_113P62684 666 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 IRX3P78415 501 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-217ENST00000490543 TFCP2Q12800 502 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 GPRC5AQ8NFJ5 357 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 WDR18Q9BV38 432 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 HMG20BQ9P0W2 317 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 TTC28Q96AY4 2481 aa11.1□□□□□ -0.63
SRRM1-217ENST00000490543 ATAD5Q96QE3 1844 aa11.09□□□□□ -0.63
SRRM1-217ENST00000490543 TTC24A2A3L6 582 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-217ENST00000490543 CFAP99D6REC4 459 aa11.09□□□□□ -0.63
SRRM1-217ENST00000490543 ZKSCAN1P17029 563 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-217ENST00000490543 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-217ENST00000490543 TEX11Q8IYF3 940 aa11.09□□□□□ -0.63
SRRM1-217ENST00000490543 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-217ENST00000490543 AS3MTQ9HBK9 375 aa11.09□□□□□ -0.63
SRRM1-217ENST00000490543 EVA1BQ9NVM1 165 aa11.09□□□□□ -0.63
SRRM1-217ENST00000490543 LDHCP07864 332 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 MAPK4P31152 587 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 ERVK-24P63145 666 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 GPR142Q7Z601 462 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 SOCS4Q8WXH5 440 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 NEUROD6Q96NK8 337 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 MEIS3Q99687 375 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 PAGR1Q9BTK6 254 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 SENP6Q9GZR1 1112 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-217ENST00000490543 DNAJC18Q9H819 358 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 TMOD4Q9NZQ9 345 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 PI4KBQ9UBF8 816 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
SRRM1-217ENST00000490543 NDUFB9Q9Y6M9 179 aa11.08□□□□□ -0.64
SRRM1-217ENST00000490543 LAMA2P24043 3122 aaKnown RBP11.08□□□□□ -0.64
SRRM1-217ENST00000490543 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
SRRM1-217ENST00000490543 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 ST8SIA5O15466 376 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 ANP32CO43423 234 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 GDF11O95390 407 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 MAP4K4O95819 1239 aaPredicted RBP11.07□□□□□ -0.64
SRRM1-217ENST00000490543 ASNSP08243 561 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 RGS2P41220 211 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 GSTO1P78417 241 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 PDE3AQ14432 1141 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 MVPQ14764 893 aaKnown RBP11.07□□□□□ -0.64
SRRM1-217ENST00000490543 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
SRRM1-217ENST00000490543 SNIP1Q8TAD8 396 aaKnown RBP11.07□□□□□ -0.64
SRRM1-217ENST00000490543 SMC4Q9NTJ3 1288 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 SIPA1L1O43166 1804 aa11.07□□□□□ -0.64
SRRM1-217ENST00000490543 VCANP13611 3396 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 C19orf81C9J6K1 198 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 AVPP01185 164 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 MCAMP43121 646 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 KCNH2Q12809 1159 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 ALDH1L2Q3SY69 923 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 MAPKAPK5Q8IW41 473 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 CCAR1Q8IX12 1150 aaKnown RBP11.06□□□□□ -0.64
SRRM1-217ENST00000490543 CDX2Q99626 313 aaPredicted RBP11.06□□□□□ -0.64
SRRM1-217ENST00000490543 APBA2Q99767 749 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 LBHD1Q9BQE6 289 aaPredicted RBP11.06□□□□□ -0.64
SRRM1-217ENST00000490543 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 AATFQ9NY61 560 aaKnown RBP eCLIP11.06□□□□□ -0.64
SRRM1-217ENST00000490543 PALD1Q9ULE6 856 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 NOB1Q9ULX3 412 aaKnown RBP11.06□□□□□ -0.64
SRRM1-217ENST00000490543 AKAP2Q9Y2D5 859 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 DNAH12Q6ZR08 3092 aa11.06□□□□□ -0.64
SRRM1-217ENST00000490543 E9PSI1 815 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 CNMDO75829 334 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 SMPD1P17405 629 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms