RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 HOXC10Q9NYD6 342 aa10.81□□□□□ -0.68
ECM1-205ENST00000490346 ISY1Q9ULR0 285 aaKnown RBP10.81□□□□□ -0.68
ECM1-205ENST00000490346 RABGAP1Q9Y3P9 1069 aa10.81□□□□□ -0.68
ECM1-205ENST00000490346 CNMDO75829 334 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 MCCP23508 829 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 DSG3P32926 999 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 FCGRTP55899 365 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 ERVK-9P63128 1117 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 ERVK-24P63145 666 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 ARHGEF6Q15052 776 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 Q3C1V9 767 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 LBX2Q6XYB7 198 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 DGKHQ86XP1 1220 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 ENAHQ8N8S7 591 aaPredicted RBP10.8□□□□□ -0.68
ECM1-205ENST00000490346 GPRC5AQ8NFJ5 357 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 NCOA7Q8NI08 942 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 GMCL1Q96IK5 515 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 ZSCAN10Q96SZ4 725 aaPredicted RBP10.8□□□□□ -0.68
ECM1-205ENST00000490346 SLF1Q9BQI6 1058 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 UBAC1Q9BSL1 405 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 BTBD7Q9P203 1132 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 PPP1R9AQ9ULJ8 1098 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 A0A0G2JMZ2 1700 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 TNKSO95271 1327 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 MYPNQ86TC9 1320 aa10.8□□□□□ -0.68
ECM1-205ENST00000490346 TNPO2O14787 897 aaKnown RBP10.79□□□□□ -0.68
ECM1-205ENST00000490346 REC8O95072 547 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 BMP3P12645 472 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 SLC1A4P43007 532 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 PKN2Q16513 984 aaKnown RBP10.79□□□□□ -0.68
ECM1-205ENST00000490346 CCDC96Q2M329 555 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 CCDC178Q5BJE1 867 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 RNF20Q5VTR2 975 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 KCTD1Q719H9 257 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 CHST3Q7LGC8 479 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 MB21D2Q8IYB1 491 aaPredicted RBP10.79□□□□□ -0.68
ECM1-205ENST00000490346 ANKS1AQ92625 1134 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 PORCNQ9H237 461 aa10.79□□□□□ -0.68
ECM1-205ENST00000490346 TMEM232C9JQI7 657 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 VWA5AO00534 786 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 GNRH1P01148 92 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 ANTXR2P58335 489 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 CCNA1P78396 465 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 PRKCZQ05513 592 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 COL9A3Q14050 684 aaPredicted RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 PLS1Q14651 629 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 TMEM132BQ14DG7 1078 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 SEC23AQ15436 765 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 IFIT1BQ5T764 474 aaKnown RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 FBXO46Q6PJ61 603 aaPredicted RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 CCAR1Q8IX12 1150 aaKnown RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 RASEFQ8IZ41 740 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 MB21D1Q8N884 522 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 PRPF38AQ8NAV1 312 aaKnown RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 KIFC2Q96AC6 838 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 KAT14Q9H8E8 782 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 SRRDQ9UH36 339 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 FEM1BQ9UK73 627 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 ADAMTS5Q9UNA0 930 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 PTPN22Q9Y2R2 807 aa10.78□□□□□ -0.68
ECM1-205ENST00000490346 COL11A1P12107 1806 aaPredicted RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 FRMPD2Q68DX3 1309 aaPredicted RBP10.78□□□□□ -0.68
ECM1-205ENST00000490346 IFIT3O14879 490 aaKnown RBP10.77□□□□□ -0.69
ECM1-205ENST00000490346 PDHBP11177 359 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 HOXD10P28358 340 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 STAT2P52630 851 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 WDR78Q5VTH9 848 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 TTBK2Q6IQ55 1244 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 COA7Q96BR5 231 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 MOV10L1Q9BXT6 1211 aaKnown RBP10.77□□□□□ -0.69
ECM1-205ENST00000490346 SPATC1LQ9H0A9 340 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 GABRQQ9UN88 632 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 GTF3C3Q9Y5Q9 886 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 PTCH2Q9Y6C5 1203 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 HTTP42858 3142 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.69
ECM1-205ENST00000490346 ERICH2A1L162 156 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 PRC1O43663 620 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 ZKSCAN1P17029 563 aaPredicted RBP10.76□□□□□ -0.69
ECM1-205ENST00000490346 MAPK4P31152 587 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 MCM5P33992 734 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 HSPA4P34932 840 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 SLC16A2P36021 539 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 FLT3LGP49771 235 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 PRMT2P55345 433 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 ZNF543Q08ER8 600 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 WTAPQ15007 396 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 SART3Q15020 963 aaKnown RBP10.76□□□□□ -0.69
ECM1-205ENST00000490346 ADCK5Q3MIX3 580 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 TMEM67Q5HYA8 995 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 GPR142Q7Z601 462 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 FAM160B2Q86V87 743 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 REPS2Q8NFH8 660 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 IGDCC4Q8TDY8 1250 aa10.76□□□□□ -0.69
ECM1-205ENST00000490346 CHURC1Q8WUH1 139 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms