RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 HIF3AQ9Y2N7 669 aa8.64□□□□□ -1.03
TM9SF3-206ENST00000490192 SCO2A0A1W2PP80 73 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 FSCN2O14926 492 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 ALX3O95076 343 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 RASGRP1O95267 797 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 ITGAVP06756 1048 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 MCL1Q07820 350 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 MAP7Q14244 749 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 LRRC41Q15345 812 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 SLFN12Q8IYM2 578 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 DDX1Q92499 740 aaKnown RBP8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 HAUS7Q99871 368 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 SSBP4Q9BWG4 385 aaPredicted RBP8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 LGR4Q9BXB1 951 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 USP26Q9BXU7 913 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 ASPSCR1Q9BZE9 553 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
TM9SF3-206ENST00000490192 C9IYK1 514 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 F8W735 103 aaPredicted RBP8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 KIF3BO15066 747 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 PRODHO43272 600 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 DNAJC8O75937 253 aaPredicted RBP8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 GLB1P16278 677 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 ITGB7P26010 798 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 RING1Q06587 406 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 STRN3Q13033 797 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 PPM1JQ5JR12 505 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 ZNF227Q86WZ6 799 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 MCATQ8IVS2 390 aaKnown RBP8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 PPM1KQ8N3J5 372 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 Q8N3U1 123 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 KLHDC7BQ96G42 594 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 TMEM87BQ96K49 555 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 PICK1Q9NRD5 415 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 APEX2Q9UBZ4 518 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 SFMBT1Q9UHJ3 866 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 PCDHGC5Q9Y5F6 944 aa8.62□□□□□ -1.03
TM9SF3-206ENST00000490192 SHTN1A0MZ66 631 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 FAM83GA6ND36 823 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 RGS13O14921 159 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 UBOX5O94941 541 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 FGFR1P11362 822 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 PABPC1P11940 636 aaKnown RBP8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 GNALP38405 381 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 GRIA2P42262 883 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 DUOXA2Q1HG44 320 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 NSMFQ6X4W1 530 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 SMC5Q8IY18 1101 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 AHI1Q8N157 1196 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 GALNT11Q8NCW6 608 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 MEGF10Q96KG7 1140 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 FGD4Q96M96 766 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 WDR18Q9BV38 432 aa8.61□□□□□ -1.03
TM9SF3-206ENST00000490192 SCGB1D2O95969 90 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 SLFN14P0C7P3 912 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 NLRP12P59046 1061 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 BIRC2Q13490 618 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 MAP9Q49MG5 647 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 CCSAPQ6IQ19 270 aaPredicted RBP8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 LHFPL2Q6ZUX7 228 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 OSBP2Q969R2 916 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 CEP41Q9BYV8 373 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 KLHL25Q9H0H3 589 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 TRIM39Q9HCM9 518 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 SLC5A4Q9NY91 659 aa8.6□□□□□ -1.03
TM9SF3-206ENST00000490192 CBFA2T2O43439 604 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 AOC2O75106 756 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 GBP1P32455 592 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 RAB27AP51159 221 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 NEK2P51955 445 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 ERVK-24P63145 666 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 MTMR1Q13613 665 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 PCBP1Q15365 356 aaKnown RBP eCLIP8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 TRIM61Q5EBN2 209 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 ZBTB37Q5TC79 503 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 SLC6A19Q695T7 634 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 ACAD11Q709F0 780 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 NECAB2Q7Z6G3 386 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 ADAT2Q7Z6V5 191 aaKnown RBP8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 DZIP1LQ8IYY4 767 aaKnown RBP8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 AGGF1Q8N302 714 aaeCLIP8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 ZNF513Q8N8E2 541 aaPredicted RBP8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 SLC7A14Q8TBB6 771 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 SMARCC1Q92922 1105 aaPredicted RBP8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 SMAD5Q99717 465 aaKnown RBP8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 NDOR1Q9UHB4 597 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 PHLDB1Q86UU1 1377 aa8.59□□□□□ -1.03
TM9SF3-206ENST00000490192 LOC100289279A0A1B0GTE1 492 aa8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 TBX1O43435 398 aa8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 CLEC3AO75596 197 aa8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 EIF3JO75822 258 aaKnown RBP8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 NEK4P51957 841 aa8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 ITKQ08881 620 aa8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 HP1BP3Q5SSJ5 553 aaPredicted RBP8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 DCAF15Q66K64 600 aa8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 PKN3Q6P5Z2 889 aa8.58□□□□□ -1.04
TM9SF3-206ENST00000490192 PRR23CQ6ZRP0 262 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms