RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 NKX2-3Q8TAU0 364 aa18.18■□□□□ 0.5
SMIM11A-206ENST00000489469 TANGO6Q9C0B7 1094 aa18.18■□□□□ 0.5
SMIM11A-206ENST00000489469 SNX14Q9Y5W7 946 aa18.18■□□□□ 0.5
SMIM11A-206ENST00000489469 MYPNQ86TC9 1320 aa18.18■□□□□ 0.5
SMIM11A-206ENST00000489469 FOXN1O15353 648 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 PRC1O43663 620 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 CYP2C8P10632 490 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 SLC1A4P43007 532 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 ANAPC15P60006 121 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 COG2Q14746 738 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 WTAPQ15007 396 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 SEC23AQ15436 765 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 KIAA1755Q5JYT7 1200 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 DHX32Q7L7V1 743 aaKnown RBP18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 TMTC2Q8N394 836 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 DCAF4Q8WV16 495 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 HOXC10Q9NYD6 342 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 ADGRA2Q96PE1 1338 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 CASP8AP2Q9UKL3 1982 aa18.17■□□□□ 0.5
SMIM11A-206ENST00000489469 BMP3P12645 472 aa18.16■□□□□ 0.5
SMIM11A-206ENST00000489469 ANTXR2P58335 489 aa18.16■□□□□ 0.5
SMIM11A-206ENST00000489469 HERVK_113P62684 666 aa18.16■□□□□ 0.5
SMIM11A-206ENST00000489469 TMEM67Q5HYA8 995 aa18.16■□□□□ 0.5
SMIM11A-206ENST00000489469 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
SMIM11A-206ENST00000489469 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
SMIM11A-206ENST00000489469 PNMA1Q8ND90 353 aa18.16■□□□□ 0.5
SMIM11A-206ENST00000489469 GPR25O00155 361 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 FLOT1O75955 427 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 HSPA8P11142 646 aaKnown RBP18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 ADCK5Q3MIX3 580 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 BLOC1S2Q6QNY1 142 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 C17orf99Q6UX52 265 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 IGDCC4Q8TDY8 1250 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 JAKMIP1Q96N16 626 aaKnown RBP18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 P2RX7Q99572 595 aaKnown RBP18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 TM6SF1Q9BZW5 370 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 FEM1BQ9UK73 627 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 MGAMO43451 1857 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 A0A0G2JMZ2 1700 aa18.15■□□□□ 0.5
SMIM11A-206ENST00000489469 COL11A1P12107 1806 aaPredicted RBP18.14■□□□□ 0.5
SMIM11A-206ENST00000489469 PLA2G6O60733 806 aa18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 LIFRP42702 1097 aa18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 FAM110CQ1W6H9 321 aa18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 CHST3Q7LGC8 479 aa18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 FAM160B2Q86V87 743 aa18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 MB21D1Q8N884 522 aa18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 CHURC1Q8WUH1 139 aa18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.49
SMIM11A-206ENST00000489469 SH2B2O14492 632 aaPredicted RBP18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 FKTNO75072 461 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 SEC24BO95487 1268 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 SNHG28P0DPA3 235 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 FDX1P10109 184 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 PDHBP11177 359 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 STAT2P52630 851 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 EXOSC10Q01780 885 aaKnown RBP18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 CCDC96Q2M329 555 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 GPATCH4Q5T3I0 446 aaKnown RBP18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 PRPF38AQ8NAV1 312 aaKnown RBP18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 SLF1Q9BQI6 1058 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 TSKSQ9UJT2 592 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 PPP1R9AQ9ULJ8 1098 aa18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
SMIM11A-206ENST00000489469 MYH6P13533 1939 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 SPDYE16A6NNV3 312 aaPredicted RBP18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 BCRP11274 1271 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 CASTP20810 708 aaKnown RBP18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 SP3Q02447 781 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 ARHGEF6Q15052 776 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 CATIPQ7Z7H3 387 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 IL17RAQ96F46 866 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 ERO1AQ96HE7 468 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 NUP88Q99567 741 aaPredicted RBP18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 LY9Q9HBG7 655 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 MORF4L1Q9UBU8 362 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 CPA4Q9UI42 421 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 MTMR7Q9Y216 660 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 RABGAP1Q9Y3P9 1069 aa18.12■□□□□ 0.49
SMIM11A-206ENST00000489469 CCDC69A6NI79 296 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 TMEM232C9JQI7 657 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 RPS6KB1P23443 525 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 LBX1P52954 281 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 FGD1P98174 961 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 ZNF543Q08ER8 600 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 IKQ13123 557 aaPredicted RBP18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 KIF22Q14807 665 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 NFXL1Q6ZNB6 911 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 FBXL16Q8N461 479 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 ANKRD13CQ8N6S4 541 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 ZNF296Q8WUU4 475 aaPredicted RBP18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 ZSWIM6Q9HCJ5 1215 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 PRDM10Q9NQV6 1147 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 CYP46A1Q9Y6A2 500 aa18.11■□□□□ 0.49
SMIM11A-206ENST00000489469 DDAH1O94760 285 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 PARP1P09874 1014 aaKnown RBP18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 CALM1P0DP23 149 aa18.1■□□□□ 0.49
SMIM11A-206ENST00000489469 CALM2P0DP24 149 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms