RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 IVNS1ABPQ9Y6Y0 642 aa15.82■□□□□ 0.12
CCL28-202ENST00000489442 RLFQ13129 1914 aa15.82■□□□□ 0.12
CCL28-202ENST00000489442 PARP14Q460N5 1801 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 CNMDO75829 334 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 FGRP09769 529 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 IRF5Q13568 498 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 POTEEQ6S8J3 1075 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 GPR142Q7Z601 462 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 STAG1Q8WVM7 1258 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 NUP88Q99567 741 aaPredicted RBP15.81■□□□□ 0.12
CCL28-202ENST00000489442 CTDP1Q9Y5B0 961 aaPredicted RBP15.81■□□□□ 0.12
CCL28-202ENST00000489442 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 COL11A1P12107 1806 aaPredicted RBP15.81■□□□□ 0.12
CCL28-202ENST00000489442 LAMA4Q16363 1823 aa15.81■□□□□ 0.12
CCL28-202ENST00000489442 NMT2O60551 498 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 ELNP15502 786 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 SLFN13Q68D06 897 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 GMCL1P1Q8NEA9 526 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 PXYLP1Q8TE99 480 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 SOCS4Q8WXH5 440 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 ESR2Q92731 530 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 FBXO28Q9NVF7 368 aa15.8■□□□□ 0.12
CCL28-202ENST00000489442 CYP2B6P20813 491 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 RGS19P49795 217 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 MLLT1Q03111 559 aaPredicted RBP15.79■□□□□ 0.12
CCL28-202ENST00000489442 IKQ13123 557 aaPredicted RBP15.79■□□□□ 0.12
CCL28-202ENST00000489442 SKAP1Q86WV1 359 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 TBC1D10CQ8IV04 446 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 PRPF38AQ8NAV1 312 aaKnown RBP15.79■□□□□ 0.12
CCL28-202ENST00000489442 CHMP4CQ96CF2 233 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 SLF1Q9BQI6 1058 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 SPATC1LQ9H0A9 340 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 IL25Q9H293 177 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 IL17RBQ9NRM6 502 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 GJD2Q9UKL4 321 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 PPP1R9AQ9ULJ8 1098 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 MTMR7Q9Y216 660 aa15.79■□□□□ 0.12
CCL28-202ENST00000489442 BMP3P12645 472 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 RGS2P41220 211 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 SLC1A4P43007 532 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 KIAA1211Q6ZU35 1233 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 NCAPG2Q86XI2 1143 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 KIFC2Q96AC6 838 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 MOV10L1Q9BXT6 1211 aaKnown RBP15.78■□□□□ 0.12
CCL28-202ENST00000489442 NBPF3Q9H094 633 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 PLXNB2O15031 1838 aa15.78■□□□□ 0.12
CCL28-202ENST00000489442 ZNFX1Q9P2E3 1918 aaKnown RBP15.77■□□□□ 0.12
CCL28-202ENST00000489442 PDE4DIPQ5VU43 2346 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 POTEFA5A3E0 1075 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 SLC15A5A6NIM6 579 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 VWA5AO00534 786 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 SGSM2O43147 1006 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 ZBED4O75132 1171 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 INHAP05111 366 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 MCCP23508 829 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 MTFR1Q15390 333 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 RNF208Q9H0X6 261 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 TCP11L1Q9NUJ3 509 aa15.77■□□□□ 0.12
CCL28-202ENST00000489442 A0A0G2JMZ2 1700 aa15.77■□□□□ 0.11
CCL28-202ENST00000489442 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 STRNO43815 780 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 KDM4AO75164 1064 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 SLC25A27O95847 323 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 HMGCRP04035 888 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 TOP1P11387 765 aaKnown RBP15.76■□□□□ 0.11
CCL28-202ENST00000489442 XRCC5P13010 732 aaKnown RBP15.76■□□□□ 0.11
CCL28-202ENST00000489442 CCL5P13501 91 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 ERCC3P19447 782 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 PTPREP23469 700 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 STAT3P40763 770 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 NT5C2P49902 561 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 STAT2P52630 851 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 PTH1RQ03431 593 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 MAP2K5Q13163 448 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 TMEM132BQ14DG7 1078 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 CCDC178Q5BJE1 867 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 BMP2KLQ5H9B9 411 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 TRMT44Q8IYL2 757 aaKnown RBP15.76■□□□□ 0.11
CCL28-202ENST00000489442 SHCBP1Q8NEM2 672 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 CHURC1Q8WUH1 139 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 GMCL1Q96IK5 515 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 KRT23Q9C075 422 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 MROH8Q9H579 483 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 CNNM2Q9H8M5 875 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 ADAMTS5Q9UNA0 930 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
CCL28-202ENST00000489442 NEDD4P46934 1319 aa15.76■□□□□ 0.11
CCL28-202ENST00000489442 RBBP6Q7Z6E9 1792 aaKnown RBP15.76■□□□□ 0.11
CCL28-202ENST00000489442 ZKSCAN1P17029 563 aaPredicted RBP15.75■□□□□ 0.11
CCL28-202ENST00000489442 TRDNQ13061 729 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 CCDC96Q2M329 555 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 MORN1Q5T089 497 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 CASC1Q6TDU7 716 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 DPP9Q86TI2 863 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 CPXCR1Q8N123 301 aa15.75■□□□□ 0.11
CCL28-202ENST00000489442 TTC14Q96N46 770 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms