RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 TSPY4P0CV99 314 aa7.54□□□□□ -1.2
RAB4A-204ENST00000489342 TSPY10P0CW01 314 aa7.54□□□□□ -1.2
RAB4A-204ENST00000489342 CWF19L2Q2TBE0 894 aaKnown RBP7.54□□□□□ -1.2
RAB4A-204ENST00000489342 SFRP5Q5T4F7 317 aa7.54□□□□□ -1.2
RAB4A-204ENST00000489342 MRPL41Q8IXM3 137 aaKnown RBP7.54□□□□□ -1.2
RAB4A-204ENST00000489342 HRASLS5Q96KN8 279 aa7.54□□□□□ -1.2
RAB4A-204ENST00000489342 MAPK8IP1Q9UQF2 711 aa7.54□□□□□ -1.2
RAB4A-204ENST00000489342 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
RAB4A-204ENST00000489342 NLRP1Q9C000 1473 aa7.54□□□□□ -1.2
RAB4A-204ENST00000489342 MBD5Q9P267 1494 aa7.54□□□□□ -1.2
RAB4A-204ENST00000489342 XIRP1Q702N8 1843 aaKnown RBP7.53□□□□□ -1.2
RAB4A-204ENST00000489342 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
RAB4A-204ENST00000489342 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAB4A-204ENST00000489342 CYP7A1P22680 504 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 IRAK1P51617 712 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 AOC3Q16853 763 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 FBXL19Q6PCT2 694 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 FAM196AQ6ZSG2 479 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 MCATQ8IVS2 390 aaKnown RBP7.53□□□□□ -1.2
RAB4A-204ENST00000489342 AGBL5Q8NDL9 886 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 FBXO27Q8NI29 283 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 ZNF296Q8WUU4 475 aaPredicted RBP7.53□□□□□ -1.2
RAB4A-204ENST00000489342 ACSF2Q96CM8 615 aaPredicted RBP7.53□□□□□ -1.2
RAB4A-204ENST00000489342 KLHL3Q9UH77 587 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 OAS3Q9Y6K5 1087 aaKnown RBP7.53□□□□□ -1.2
RAB4A-204ENST00000489342 U3KQE9 123 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 ROBO1Q9Y6N7 1651 aa7.53□□□□□ -1.2
RAB4A-204ENST00000489342 FAM135BQ49AJ0 1406 aa7.52□□□□□ -1.2
RAB4A-204ENST00000489342 DEPDC5O75140 1603 aa7.52□□□□□ -1.2
RAB4A-204ENST00000489342 SCAF11Q99590 1463 aaKnown RBP7.52□□□□□ -1.21
RAB4A-204ENST00000489342 FYCO1Q9BQS8 1478 aa7.52□□□□□ -1.21
RAB4A-204ENST00000489342 YARSP54577 528 aaKnown RBP7.52□□□□□ -1.21
RAB4A-204ENST00000489342 PRKCQQ04759 706 aa7.52□□□□□ -1.21
RAB4A-204ENST00000489342 BNIP3Q12983 259 aa7.52□□□□□ -1.21
RAB4A-204ENST00000489342 REC114Q7Z4M0 266 aa7.52□□□□□ -1.21
RAB4A-204ENST00000489342 CDH24Q86UP0 819 aa7.52□□□□□ -1.21
RAB4A-204ENST00000489342 BCL7CQ8WUZ0 217 aaPredicted RBP7.52□□□□□ -1.21
RAB4A-204ENST00000489342 VAV3Q9UKW4 847 aa7.52□□□□□ -1.21
RAB4A-204ENST00000489342 TIAM1Q13009 1591 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 ROBO2Q9HCK4 1378 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 CBX7O95931 251 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 KCNA6P17658 529 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 GARTP22102 1010 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 ETV3P41162 512 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 CHMP4BP1P59074 171 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 FAM214BQ7L5A3 538 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 RIN3Q8TB24 985 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 RNF34Q969K3 372 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 METTL5Q9NRN9 209 aaKnown RBP7.51□□□□□ -1.21
RAB4A-204ENST00000489342 RRP7BPQ9NSQ0 103 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 REV1Q9UBZ9 1251 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 PLAGL2Q9UPG8 496 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 RTEL1-TNFRSF6BF6WH68 1400 aa7.51□□□□□ -1.21
RAB4A-204ENST00000489342 ZC3H13Q5T200 1668 aaKnown RBP7.51□□□□□ -1.21
RAB4A-204ENST00000489342 SYNMO15061 1565 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 ERVK-7P63135 1459 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 NCOA2Q15596 1464 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 LRP6O75581 1613 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 HTR3BO95264 441 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 MCM4P33991 863 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 TNNI2P48788 182 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 PLCL1Q15111 1095 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 ZNF574Q6ZN55 896 aaPredicted RBP7.5□□□□□ -1.21
RAB4A-204ENST00000489342 USP48Q86UV5 1035 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 MFSD4AQ8N468 514 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 MRRFQ96E11 262 aaKnown RBP7.5□□□□□ -1.21
RAB4A-204ENST00000489342 POLR3KQ9Y2Y1 108 aaPredicted RBP7.5□□□□□ -1.21
RAB4A-204ENST00000489342 SNX11Q9Y5W9 270 aa7.5□□□□□ -1.21
RAB4A-204ENST00000489342 PHLPP1O60346 1717 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 CAMSAP2Q08AD1 1489 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 CCDC141Q6ZP82 1450 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 JCADQ9P266 1359 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 ABCC3O15438 1527 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 UPK3BL1B0FP48 263 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 UPK3BL2E5RIL1 263 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 FANCCQ00597 558 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 APOBRQ0VD83 1088 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 IDI1Q13907 227 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 TMEM201Q5SNT2 666 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 CDKAL1Q5VV42 579 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 ZNF772Q68DY9 489 aaPredicted RBP7.49□□□□□ -1.21
RAB4A-204ENST00000489342 KIAA0825Q8IV33 1275 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 PHACTR4Q8IZ21 702 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 ABI1Q8IZP0 508 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 ASB11Q8WXH4 323 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 DDX17Q92841 729 aaKnown RBP7.49□□□□□ -1.21
RAB4A-204ENST00000489342 COX4I2Q96KJ9 171 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 SPON2Q9BUD6 331 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 BRMS1Q9HCU9 246 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
RAB4A-204ENST00000489342 ADAMTS1Q9UHI8 967 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 PCDHB14Q9Y5E9 798 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 UBR1Q8IWV7 1749 aa7.49□□□□□ -1.21
RAB4A-204ENST00000489342 MSH6P52701 1360 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 GREM1O60565 184 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 CEP152O94986 1710 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 CD8BP10966 210 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 CLCN7P51798 805 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 SEZ6Q53EL9 994 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 ANGEL2Q5VTE6 544 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms