RNA–Protein interactions for RNA: ENST00000489253.1

SNRPD2P1-201, Transcript of small nuclear ribonucleoprotein D2 pseudogene 1, humanhuman

BASIC

Gene SNRPD2P1, Length 354 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2P1-201ENST00000489253 CALM3P0DP25 149 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 BMP3P12645 472 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 CCT2P78371 535 aaKnown RBP9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 TROAPQ12815 778 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 GRM4Q14833 912 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 RTN1Q16799 776 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 ASPRV1Q53RT3 343 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 SH3D19Q5HYK7 790 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 TREML2Q5T2D2 321 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 HSCBQ8IWL3 235 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 FBXL16Q8N461 479 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 PROCA1Q8NCQ7 364 aaPredicted RBP9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 BRI3BPQ8WY22 251 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 LPAR1Q92633 364 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 GMCL1Q96IK5 515 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 ALDH8A1Q9H2A2 487 aaPredicted RBP9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 LIMCH1Q9UPQ0 1083 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 AGTPBP1Q9UPW5 1226 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 MYH4Q9Y623 1939 aa9.35□□□□□ -0.91
SNRPD2P1-201ENST00000489253 TMEM232C9JQI7 657 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 DHX16O60231 1041 aaKnown RBP9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 FLOT1O75955 427 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 PLEKHA8P1O95397 391 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 SNHG28P0DPA3 235 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 PDIA3P30101 505 aaKnown RBP9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 KIF5BP33176 963 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 IRX3P78415 501 aaPredicted RBP9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 ZNF543Q08ER8 600 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 SREBF2Q12772 1141 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 NOGQ13253 232 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 GPATCH4Q5T3I0 446 aaKnown RBP9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 TTBK2Q6IQ55 1244 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 FASTKD5Q7L8L6 764 aaKnown RBP9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 STAG2Q8N3U4 1231 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 MS4A4AQ96JQ5 239 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 SLKQ9H2G2 1235 aaPredicted RBP9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 CPVLQ9H3G5 476 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 NCOA5Q9HCD5 579 aaKnown RBP9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 FBXO28Q9NVF7 368 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 HPS5Q9UPZ3 1129 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 NID2Q14112 1375 aa9.34□□□□□ -0.91
SNRPD2P1-201ENST00000489253 WDR33Q9C0J8 1336 aaKnown RBP9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 BTBD19C9JJ37 291 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 CDC27P30260 824 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 SLC16A2P36021 539 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 ANP32AP39687 249 aaKnown RBP9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 MCM2P49736 904 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 VEGFBP49765 207 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 STAT2P52630 851 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 RCAN1P53805 252 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 KIF23Q02241 960 aaPredicted RBP9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 MOGSQ13724 837 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 ME3Q16798 604 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 CCDC83Q8IWF9 413 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 CMTR1Q8N1G2 835 aaKnown RBP9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 FANCBQ8NB91 859 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 PIBF1Q8WXW3 757 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 GTF3C6Q969F1 213 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 KIFC2Q96AC6 838 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 ZNF274Q96GC6 653 aaPredicted RBP9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 UBA5Q9GZZ9 404 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 RBM28Q9NW13 759 aaKnown RBP9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 MAD2L2Q9UI95 211 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 PTPRFP10586 1907 aa9.33□□□□□ -0.92
SNRPD2P1-201ENST00000489253 THSD7BQ9C0I4 1608 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 CCDC196A0A1B0GTZ2 297 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L15C9J2P7 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L13C9JLJ4 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L11C9JVI0 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L18D6R9N7 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L22D6RA61 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L17D6RBQ6 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L19D6RCP7 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L20D6RJB6 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 PDHXO00330 501 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 IGF2BP3O00425 579 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 CPLX1O14810 134 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 PFKFB2O60825 505 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 DTNBO60941 627 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 PPFIA3O75145 1194 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 EVCP57679 992 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 SNAP25P60880 206 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 USP17L24Q0WX57 530 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 ST3GAL1Q11201 340 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 SCRN1Q12765 414 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 SYDE2Q5VT97 1194 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 GPAT2Q6NUI2 795 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 TMTC3Q6ZXV5 915 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 ANKRD23Q86SG2 305 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 FAM160B2Q86V87 743 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 FAM43AQ8N2R8 423 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 CCDC82Q8N4S0 544 aa9.32□□□□□ -0.92
SNRPD2P1-201ENST00000489253 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms