RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 TTC31Q49AM3 519 aaPredicted RBP20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 CC2D2BQ6DHV5 1058 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 TMTC2Q8N394 836 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 CRACR2BQ8N4Y2 399 aaPredicted RBP20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 OSBPL5Q9H0X9 879 aaPredicted RBP20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 SH3BP1Q9Y3L3 701 aa20.78■□□□□ 0.92
POLR2J3-205ENST00000489144 ZNF646O15015 1829 aaPredicted RBP20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 FMNL1O95466 1100 aaPredicted RBP20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 DNAJC21Q5F1R6 531 aaKnown RBP20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 LEO1Q8WVC0 666 aaPredicted RBP20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 SHISA4Q96DD7 197 aa20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 ZDHHC15Q96MV8 337 aa20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 KAT14Q9H8E8 782 aa20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 V9GY48 417 aaPredicted RBP20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 ROBO3Q96MS0 1386 aa20.77■□□□□ 0.92
POLR2J3-205ENST00000489144 AKR1B1P15121 316 aa20.77■□□□□ 0.91
POLR2J3-205ENST00000489144 IFNAR1P17181 557 aa20.77■□□□□ 0.91
POLR2J3-205ENST00000489144 PTGER2P43116 358 aa20.77■□□□□ 0.91
POLR2J3-205ENST00000489144 NOM1Q5C9Z4 860 aaKnown RBP20.77■□□□□ 0.91
POLR2J3-205ENST00000489144 CEP95Q96GE4 821 aa20.77■□□□□ 0.91
POLR2J3-205ENST00000489144 FAM198AQ9UFP1 575 aa20.77■□□□□ 0.91
POLR2J3-205ENST00000489144 CCDC189A1A4V9 331 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 PCP11498 1178 aaKnown RBP20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 TNNT1P13805 278 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 ZSCAN26Q16670 478 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 SRBD1Q8N5C6 995 aaKnown RBP20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 PNMA1Q8ND90 353 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 VPS54Q9P1Q0 977 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 SGSM3Q96HU1 749 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 PSMD1Q99460 953 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 SGIP1Q9BQI5 828 aa20.76■□□□□ 0.91
POLR2J3-205ENST00000489144 TCP10L2B9ZVM9 353 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 NFKBIEO00221 500 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 MPHOSPH10O00566 681 aaKnown RBP20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 TGFB2P61812 414 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 KIF23Q02241 960 aaPredicted RBP20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 SWT1Q5T5J6 900 aaKnown RBP20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 SH3BP5LQ7L8J4 393 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 TMEM47Q9BQJ4 181 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 ATP2B2Q01814 1243 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 GNL2Q13823 731 aaKnown RBP20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 NIM1KQ8IY84 436 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 CLIC4Q9Y696 253 aa20.75■□□□□ 0.91
POLR2J3-205ENST00000489144 RSBN1LQ6PCB5 846 aaPredicted RBP20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 TRIM22Q8IYM9 498 aa20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 TMEM87AQ8NBN3 555 aa20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 PGBD1Q96JS3 809 aa20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 ZSCAN16Q9H4T2 348 aaPredicted RBP20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 RRP15Q9Y3B9 282 aaKnown RBP20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 LIG1P18858 919 aa20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 CDAN1Q8IWY9 1227 aa20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 CTCFLQ8NI51 663 aaPredicted RBP20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 OXER1Q8TDS5 423 aa20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 C16orf45Q96MC5 204 aaPredicted RBP20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 DNAJC18Q9H819 358 aa20.74■□□□□ 0.91
POLR2J3-205ENST00000489144 FOCADQ5VW36 1801 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 KIF13BQ9NQT8 1826 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 UBE2HP62256 183 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 SEMA3FQ13275 785 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 NR5A1Q13285 461 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 TAOK3Q9H2K8 898 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 SERPINB13Q9UIV8 391 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 BTBD18B2RXH4 712 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 PRELPP51888 382 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 CXCL9Q07325 125 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 FUT2Q10981 343 aa20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 RBM26Q5T8P6 1007 aaKnown RBP20.73■□□□□ 0.91
POLR2J3-205ENST00000489144 ADAMTS3O15072 1205 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 RAD21O60216 631 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 TPM4P67936 248 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 GPS2Q13227 327 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 TRIM29Q14134 588 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 TMTC3Q6ZXV5 915 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 PACS2Q86VP3 889 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 CCDC196A0A1B0GTZ2 297 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 SHMT1P34896 483 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 PKN1Q16512 942 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 USP17L2Q6R6M4 530 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 VEZTQ9HBM0 779 aa20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 RBM28Q9NW13 759 aaKnown RBP20.72■□□□□ 0.91
POLR2J3-205ENST00000489144 GABPAQ06546 454 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 SERPINA10Q9UK55 444 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 FAM205CA6NFA0 338 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 DDAH1O94760 285 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 EGFRP00533 1210 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 AKAP17AQ02040 695 aaKnown RBP20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 NID2Q14112 1375 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 CAMK4Q16566 473 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 SLC35G1Q2M3R5 365 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 SUGP1Q8IWZ8 645 aaKnown RBP20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 GPKOWQ92917 476 aaPredicted RBP eCLIP20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 ZNRF3Q9ULT6 936 aa20.71■□□□□ 0.91
POLR2J3-205ENST00000489144 FRMPD2Q68DX3 1309 aaPredicted RBP20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 CNTNAP5Q8WYK1 1306 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 GDF11O95390 407 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 MAGEA9P43362 315 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 FHOD1Q9Y613 1164 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms