RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NT5C2P49902 561 aa16.88■□□□□ 0.29
BRCA1-218ENST00000489037 PLS1Q14651 629 aa16.88■□□□□ 0.29
BRCA1-218ENST00000489037 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
BRCA1-218ENST00000489037 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
BRCA1-218ENST00000489037 PORCNQ9H237 461 aa16.88■□□□□ 0.29
BRCA1-218ENST00000489037 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
BRCA1-218ENST00000489037 BTBD7Q9P203 1132 aa16.88■□□□□ 0.29
BRCA1-218ENST00000489037 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
BRCA1-218ENST00000489037 LAMA4Q16363 1823 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 CHMLP26374 656 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 SLFN13Q68D06 897 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 TRMT44Q8IYL2 757 aaKnown RBP16.87■□□□□ 0.29
BRCA1-218ENST00000489037 GMCL1P1Q8NEA9 526 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 STAG1Q8WVM7 1258 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 ESR2Q92731 530 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 ATG4CQ96DT6 458 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 SPATC1LQ9H0A9 340 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 GJD2Q9UKL4 321 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 PPP1R9AQ9ULJ8 1098 aa16.87■□□□□ 0.29
BRCA1-218ENST00000489037 RBBP6Q7Z6E9 1792 aaKnown RBP16.87■□□□□ 0.29
BRCA1-218ENST00000489037 ELNP15502 786 aa16.86■□□□□ 0.29
BRCA1-218ENST00000489037 CYP2B6P20813 491 aa16.86■□□□□ 0.29
BRCA1-218ENST00000489037 RGS2P41220 211 aa16.86■□□□□ 0.29
BRCA1-218ENST00000489037 POTEEQ6S8J3 1075 aa16.86■□□□□ 0.29
BRCA1-218ENST00000489037 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
BRCA1-218ENST00000489037 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
BRCA1-218ENST00000489037 SLF1Q9BQI6 1058 aa16.86■□□□□ 0.29
BRCA1-218ENST00000489037 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
BRCA1-218ENST00000489037 ZNFX1Q9P2E3 1918 aaKnown RBP16.86■□□□□ 0.29
BRCA1-218ENST00000489037 PLXNB2O15031 1838 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 SLC15A5A6NIM6 579 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 SLC25A27O95847 323 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 BMP3P12645 472 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 XRCC5P13010 732 aaKnown RBP16.85■□□□□ 0.29
BRCA1-218ENST00000489037 IKQ13123 557 aaPredicted RBP16.85■□□□□ 0.29
BRCA1-218ENST00000489037 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 NCAPG2Q86XI2 1143 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 SHCBP1Q8NEM2 672 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 NKX2-3Q8TAU0 364 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
BRCA1-218ENST00000489037 RNF208Q9H0X6 261 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 MROH8Q9H579 483 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 TCP11L1Q9NUJ3 509 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
BRCA1-218ENST00000489037 A0A0G2JMZ2 1700 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 VWA5AO00534 786 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 STRNO43815 780 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 ZBED4O75132 1171 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 HMGCRP04035 888 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 INHAP05111 366 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 CCL5P13501 91 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 PTPREP23469 700 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 COPB2P35606 906 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 SLC1A4P43007 532 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 MAP2K5Q13163 448 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 IQCA1Q86XH1 822 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 TBC1D10CQ8IV04 446 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 CHURC1Q8WUH1 139 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 KRT23Q9C075 422 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 IL17RBQ9NRM6 502 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 ADAMTS5Q9UNA0 930 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 TACC3Q9Y6A5 838 aa16.84■□□□□ 0.29
BRCA1-218ENST00000489037 POTEFA5A3E0 1075 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 NMT2O60551 498 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 FDX1P10109 184 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
BRCA1-218ENST00000489037 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
BRCA1-218ENST00000489037 ERCC3P19447 782 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 STAT3P40763 770 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 TMEM132BQ14DG7 1078 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 MTFR1Q15390 333 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 MORN1Q5T089 497 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 FAM160B2Q86V87 743 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 KIFC2Q96AC6 838 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 GMCL1Q96IK5 515 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 TTC14Q96N46 770 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 APBA2Q99767 749 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 SLC5A4Q9NY91 659 aa16.83■□□□□ 0.28
BRCA1-218ENST00000489037 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
BRCA1-218ENST00000489037 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 SGSM2O43147 1006 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 MCCP23508 829 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 STAT2P52630 851 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 TRDNQ13061 729 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 BMP2KLQ5H9B9 411 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 DPP9Q86TI2 863 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 MTMR7Q9Y216 660 aa16.82■□□□□ 0.28
BRCA1-218ENST00000489037 GJB1P08034 283 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 FCER1AP12319 257 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 CAPN2P17655 700 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 EN2P19622 333 aaPredicted RBP16.81■□□□□ 0.28
BRCA1-218ENST00000489037 GRB14Q14449 540 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 CCDC96Q2M329 555 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 RIOX2Q8IUF8 465 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 DCAF4Q8WV16 495 aa16.81■□□□□ 0.28
BRCA1-218ENST00000489037 USP6NLQ92738 828 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms