RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 CAP1Q01518 475 aa17.81■□□□□ 0.44
FDPS-213ENST00000489003 C8orf34Q49A92 452 aa17.81■□□□□ 0.44
FDPS-213ENST00000489003 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
FDPS-213ENST00000489003 GMCL1Q96IK5 515 aa17.81■□□□□ 0.44
FDPS-213ENST00000489003 TXNRD2Q9NNW7 524 aa17.81■□□□□ 0.44
FDPS-213ENST00000489003 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
FDPS-213ENST00000489003 MTMR7Q9Y216 660 aa17.81■□□□□ 0.44
FDPS-213ENST00000489003 IFIT3O14879 490 aaKnown RBP17.8■□□□□ 0.44
FDPS-213ENST00000489003 FLOT1O75955 427 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 MCM5P33992 734 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 SLC1A4P43007 532 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 EXOSC10Q01780 885 aaKnown RBP17.8■□□□□ 0.44
FDPS-213ENST00000489003 KRT32Q14532 448 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 LBX2Q6XYB7 198 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 RASGRP2Q7LDG7 609 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 MORF4L1Q9UBU8 362 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 ADAMTS5Q9UNA0 930 aa17.8■□□□□ 0.44
FDPS-213ENST00000489003 PARP14Q460N5 1801 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 PRC1O43663 620 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 CNMDO75829 334 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 CTGFP29279 349 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 IFIT1BQ5T764 474 aaKnown RBP17.79■□□□□ 0.44
FDPS-213ENST00000489003 KCTD1Q719H9 257 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 CD99L2Q8TCZ2 262 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 GTF3C2Q8WUA4 911 aaPredicted RBP17.79■□□□□ 0.44
FDPS-213ENST00000489003 DCAF4Q8WV16 495 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 ATG4CQ96DT6 458 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 ERO1AQ96HE7 468 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
FDPS-213ENST00000489003 BTBD7Q9P203 1132 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 RABGAP1Q9Y3P9 1069 aa17.79■□□□□ 0.44
FDPS-213ENST00000489003 MYPNQ86TC9 1320 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
FDPS-213ENST00000489003 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
FDPS-213ENST00000489003 SNHG28P0DPA3 235 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 PDHBP11177 359 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 LACTBP83111 547 aaPredicted RBP17.78■□□□□ 0.44
FDPS-213ENST00000489003 WTAPQ15007 396 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 TMEM67Q5HYA8 995 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 TTBK2Q6IQ55 1244 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
FDPS-213ENST00000489003 DHX32Q7L7V1 743 aaKnown RBP17.78■□□□□ 0.44
FDPS-213ENST00000489003 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 SLF1Q9BQI6 1058 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 PAGR1Q9BTK6 254 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 ARHGAP39Q9C0H5 1083 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 FEM1BQ9UK73 627 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
FDPS-213ENST00000489003 ERICH2A1L162 156 aa17.77■□□□□ 0.44
FDPS-213ENST00000489003 PLA2G6O60733 806 aa17.77■□□□□ 0.44
FDPS-213ENST00000489003 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.44
FDPS-213ENST00000489003 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
FDPS-213ENST00000489003 CHURC1Q8WUH1 139 aa17.77■□□□□ 0.44
FDPS-213ENST00000489003 TMEM87BQ96K49 555 aa17.77■□□□□ 0.44
FDPS-213ENST00000489003 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.44
FDPS-213ENST00000489003 DOCK3Q8IZD9 2030 aa17.77■□□□□ 0.43
FDPS-213ENST00000489003 PSMC4P43686 418 aa17.76■□□□□ 0.43
FDPS-213ENST00000489003 ERVK-9P63128 1117 aa17.76■□□□□ 0.43
FDPS-213ENST00000489003 ERVK-24P63145 666 aa17.76■□□□□ 0.43
FDPS-213ENST00000489003 KIF22Q14807 665 aa17.76■□□□□ 0.43
FDPS-213ENST00000489003 COL13A1Q5TAT6 717 aaPredicted RBP17.76■□□□□ 0.43
FDPS-213ENST00000489003 JAKMIP1Q96N16 626 aaKnown RBP17.76■□□□□ 0.43
FDPS-213ENST00000489003 LY9Q9HBG7 655 aa17.76■□□□□ 0.43
FDPS-213ENST00000489003 GPCPD1Q9NPB8 672 aa17.76■□□□□ 0.43
FDPS-213ENST00000489003 MGAMO43451 1857 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 FRMPD2Q68DX3 1309 aaPredicted RBP17.75■□□□□ 0.43
FDPS-213ENST00000489003 ZSWIM8A7E2V4 1837 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
FDPS-213ENST00000489003 VWA5AO00534 786 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 SH2B2O14492 632 aaPredicted RBP17.75■□□□□ 0.43
FDPS-213ENST00000489003 HMGB1P09429 215 aaKnown RBP17.75■□□□□ 0.43
FDPS-213ENST00000489003 GOLGA8HP0CJ92 632 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 CPA1P15085 419 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 ZNF543Q08ER8 600 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 TMEM132BQ14DG7 1078 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 CCDC96Q2M329 555 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 FAM160B2Q86V87 743 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 TMTC2Q8N394 836 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 MB21D1Q8N884 522 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 REPS2Q8NFH8 660 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 EFCC1Q9HA90 598 aa17.75■□□□□ 0.43
FDPS-213ENST00000489003 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
FDPS-213ENST00000489003 WDR19Q8NEZ3 1342 aa17.74■□□□□ 0.43
FDPS-213ENST00000489003 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
FDPS-213ENST00000489003 PSMA5P28066 241 aa17.74■□□□□ 0.43
FDPS-213ENST00000489003 SLC16A2P36021 539 aa17.74■□□□□ 0.43
FDPS-213ENST00000489003 LIFRP42702 1097 aa17.74■□□□□ 0.43
FDPS-213ENST00000489003 STAT2P52630 851 aa17.74■□□□□ 0.43
FDPS-213ENST00000489003 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
FDPS-213ENST00000489003 TRIM47Q96LD4 638 aa17.74■□□□□ 0.43
FDPS-213ENST00000489003 PORCNQ9H237 461 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms