RNA–Protein interactions for RNA: ENST00000488981.1

NF1-212, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-212ENST00000488981 POLR3KQ9Y2Y1 108 aaPredicted RBP3.69□□□□□ -1.82
NF1-212ENST00000488981 RB1CC1Q8TDY2 1594 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 TNFRSF10CO14798 259 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 PPFIA4O75335 1185 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 LEFTY1O75610 366 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 ITGB5P18084 799 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 ENDOUP21128 410 aaKnown RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 HOXA10P31260 410 aaPredicted RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 SOX9P48436 509 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 FAM160A1Q05DH4 1040 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 FOXD4Q12950 439 aaPredicted RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 GNL2Q13823 731 aaKnown RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 RALBP1Q15311 655 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 NKPD1Q17RQ9 610 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 CC2D1BQ5T0F9 858 aaKnown RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 SLC23A3Q6PIS1 610 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 CBLL1Q75N03 491 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 APBB1IPQ7Z5R6 666 aaPredicted RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 VPS37DQ86XT2 251 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 NT5DC4Q86YG4 428 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.68□□□□□ -1.82
NF1-212ENST00000488981 SPACA3Q8IXA5 215 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 C19orf47Q8N9M1 422 aaKnown RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 PPP1R13LQ8WUF5 828 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 TMEM40Q8WWA1 233 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 VWCEQ96DN2 955 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 BORCS6Q96GS4 357 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 MIPEPQ99797 713 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 LGR6Q9HBX8 967 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 LRRC4CQ9HCJ2 640 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 BRMS1Q9HCU9 246 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 GPATCH2Q9NW75 528 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 GEMIN8Q9NWZ8 242 aaKnown RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 ZNRF3Q9ULT6 936 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.68□□□□□ -1.82
NF1-212ENST00000488981 PCDHB14Q9Y5E9 798 aa3.68□□□□□ -1.82
NF1-212ENST00000488981 UNCXA6NJT0 531 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 VGLL3A8MV65 326 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 FAM155AB1AL88 458 aaPredicted RBP3.67□□□□□ -1.82
NF1-212ENST00000488981 GOLIM4O00461 696 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 EXOC5O00471 708 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 BIN1O00499 593 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 SRFP11831 508 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 FUT4P22083 530 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 SCP2P22307 547 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 GBP1P32455 592 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 CDK8P49336 464 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 CHMP4BP1P59074 171 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 RGL3Q3MIN7 710 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 BBS9Q3SYG4 887 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 SEZ6Q53EL9 994 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 ANKRD39Q53RE8 183 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 ANGEL2Q5VTE6 544 aaKnown RBP3.67□□□□□ -1.82
NF1-212ENST00000488981 NBPF6Q5VWK0 638 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 KRBA2Q6ZNG9 492 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 DDX46Q7L014 1031 aaKnown RBP3.67□□□□□ -1.82
NF1-212ENST00000488981 NBPF5PQ86XG9 351 aaPredicted RBP3.67□□□□□ -1.82
NF1-212ENST00000488981 SHISA5Q8N114 240 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 SMARCC1Q92922 1105 aaPredicted RBP3.67□□□□□ -1.82
NF1-212ENST00000488981 GPRASP2Q96D09 838 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 NBPF4Q96M43 638 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 RAI14Q9P0K7 980 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 PLAGL2Q9UPG8 496 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 NUB1Q9Y5A7 615 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 ST14Q9Y5Y6 855 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 CAPN6Q9Y6Q1 641 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 PITPNM2Q9BZ72 1349 aa3.67□□□□□ -1.82
NF1-212ENST00000488981 GOLGA6CA6NDK9 693 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 GOLGA6BA6NDN3 693 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 ZNF500O60304 480 aaPredicted RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 APPP05067 770 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 HSP90AA1P07900 732 aaKnown RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 GOLGA6DP0CG33 693 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 NME1P15531 152 aaKnown RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 RAG1P15918 1043 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 TCF3P15923 654 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 MCM4P33991 863 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 ANP32AP39687 249 aaKnown RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 CRKP46108 304 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 RACK1P63244 317 aaKnown RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 HDLBPQ00341 1268 aaKnown RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 MAP2K1Q02750 393 aaPredicted RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 AOC3Q16853 763 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 CLEC4GQ6UXB4 293 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 NLRC3Q7RTR2 1065 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 UBE3DQ7Z6J8 389 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 ATG4DQ86TL0 474 aaPredicted RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 TP53INP2Q8IXH6 220 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 SLC43A3Q8NBI5 491 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 ATG4CQ96DT6 458 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 CRBNQ96SW2 442 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 UBA5Q9GZZ9 404 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 PDCL3Q9H2J4 239 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 PAK6Q9NQU5 681 aaPredicted RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 GOLGA6AQ9NYA3 693 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 UBP1Q9NZI7 540 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 FEZ2Q9UHY8 353 aaPredicted RBP3.66□□□□□ -1.82
NF1-212ENST00000488981 CORINQ9Y5Q5 1042 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 SPATA31D1Q6ZQQ2 1576 aa3.66□□□□□ -1.82
NF1-212ENST00000488981 BICRAQ9NZM4 1560 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms