RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 HHIPL1Q96JK4 782 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 TANGO6Q9C0B7 1094 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 SLKQ9H2G2 1235 aaPredicted RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 GPCPD1Q9NPB8 672 aa14.37□□□□□ -0.11
TRAIP-209ENST00000488860 BAZ2BQ9UIF8 2168 aaKnown RBP14.37□□□□□ -0.11
TRAIP-209ENST00000488860 A0A0G2JMZ2 1700 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 WDR46O15213 610 aaKnown RBP14.36□□□□□ -0.11
TRAIP-209ENST00000488860 BMP3P12645 472 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 KIF5BP33176 963 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 GTF2A2P52657 109 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 TROAPQ12815 778 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 CCL15Q16663 113 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 ME3Q16798 604 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 DEFB115Q30KQ5 88 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 ASPRV1Q53RT3 343 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 SH3D19Q5HYK7 790 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 IL27Q8NEV9 243 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 CCDC102AQ96A19 550 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 ZNF274Q96GC6 653 aaPredicted RBP14.36□□□□□ -0.11
TRAIP-209ENST00000488860 GMCL1Q96IK5 515 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
TRAIP-209ENST00000488860 NCOA5Q9HCD5 579 aaKnown RBP14.36□□□□□ -0.11
TRAIP-209ENST00000488860 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
TRAIP-209ENST00000488860 NID2Q14112 1375 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 THSD7BQ9C0I4 1608 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 RASSF10A6NK89 507 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 K7ELQ4 463 aaPredicted RBP14.35□□□□□ -0.11
TRAIP-209ENST00000488860 CETPP11597 493 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 EVCP57679 992 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 TREML2Q5T2D2 321 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 CCDC83Q8IWF9 413 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 STAG2Q8N3U4 1231 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 FANCBQ8NB91 859 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 PROCA1Q8NCQ7 364 aaPredicted RBP14.35□□□□□ -0.11
TRAIP-209ENST00000488860 CAPNS2Q96L46 248 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 C12orf42Q96LP6 360 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 ZSCAN31Q96LW9 406 aaPredicted RBP14.35□□□□□ -0.11
TRAIP-209ENST00000488860 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
TRAIP-209ENST00000488860 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
TRAIP-209ENST00000488860 MAD2L2Q9UI95 211 aa14.35□□□□□ -0.11
TRAIP-209ENST00000488860 RBBP6Q7Z6E9 1792 aaKnown RBP14.34□□□□□ -0.11
TRAIP-209ENST00000488860 FAM155AB1AL88 458 aaPredicted RBP14.34□□□□□ -0.11
TRAIP-209ENST00000488860 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 CPLX1O14810 134 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 DHX16O60231 1041 aaKnown RBP14.34□□□□□ -0.11
TRAIP-209ENST00000488860 PFKFB2O60825 505 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 PLEKHA8P1O95397 391 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 SNHG28P0DPA3 235 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 CDC27P30260 824 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 SLC16A2P36021 539 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 RCAN1P53805 252 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 SCRN1Q12765 414 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 GPATCH4Q5T3I0 446 aaKnown RBP14.34□□□□□ -0.11
TRAIP-209ENST00000488860 TTBK2Q6IQ55 1244 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 FASTKD5Q7L8L6 764 aaKnown RBP14.34□□□□□ -0.11
TRAIP-209ENST00000488860 CMTR1Q8N1G2 835 aaKnown RBP14.34□□□□□ -0.11
TRAIP-209ENST00000488860 GTF3C6Q969F1 213 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 SNX21Q969T3 373 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 TMX3Q96JJ7 454 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 CPVLQ9H3G5 476 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 AGTPBP1Q9UPW5 1226 aa14.34□□□□□ -0.11
TRAIP-209ENST00000488860 RBM19Q9Y4C8 960 aaKnown RBP14.34□□□□□ -0.11
TRAIP-209ENST00000488860 MANSC4A6NHS7 340 aaPredicted RBP14.33□□□□□ -0.12
TRAIP-209ENST00000488860 KLRF2D3W0D1 207 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 AOC2O75106 756 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 FLOT1O75955 427 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 STAT2P52630 851 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 BECN1Q14457 450 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 TMTC3Q6ZXV5 915 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 CCDC82Q8N4S0 544 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 PIBF1Q8WXW3 757 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 BRI3BPQ8WY22 251 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 MAP3K14Q99558 947 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
TRAIP-209ENST00000488860 CCDC196A0A1B0GTZ2 297 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 PALM3A6NDB9 673 aaPredicted RBP14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L15C9J2P7 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L13C9JLJ4 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L11C9JVI0 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L18D6R9N7 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L22D6RA61 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L17D6RBQ6 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L19D6RCP7 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L20D6RJB6 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 DTNBO60941 627 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 HSPA6P17066 643 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 ADD1P35611 737 aaKnown RBP14.32□□□□□ -0.12
TRAIP-209ENST00000488860 GNAQP50148 359 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 IRX3P78415 501 aaPredicted RBP14.32□□□□□ -0.12
TRAIP-209ENST00000488860 USP17L24Q0WX57 530 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 ST3GAL1Q11201 340 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 MOGSQ13724 837 aa14.32□□□□□ -0.12
TRAIP-209ENST00000488860 CPLX2Q6PUV4 134 aaKnown RBP14.32□□□□□ -0.12
TRAIP-209ENST00000488860 KIFC2Q96AC6 838 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms