RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 WWC2Q6AWC2 1192 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 APOBEC3HQ6NTF7 200 aaKnown RBP18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 TRIML1Q8N9V2 468 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 SPATA20Q8TB22 786 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 CCDC34Q96HJ3 373 aa18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 DDX4Q9NQI0 724 aaKnown RBP18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 BAZ2BQ9UIF8 2168 aaKnown RBP18.26■□□□□ 0.51
RAPGEF3-211ENST00000488250 F8W031 263 aaPredicted RBP18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 PTGDRQ13258 359 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 NOLC1Q14978 699 aaKnown RBP eCLIP18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 ARL6IP4Q66PJ3 421 aaKnown RBP18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 TYW1BQ6NUM6 668 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 CDC42EP5Q6NZY7 148 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 USP49Q70CQ1 688 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 GPKOWQ92917 476 aaPredicted RBP eCLIP18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 ZDHHC15Q96MV8 337 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 OSBPL5Q9H0X9 879 aaPredicted RBP18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 PICALMQ13492 652 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 SLC15A2Q16348 729 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 CNKSR1Q969H4 720 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 MXD3Q9BW11 206 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 SERPINB13Q9UIV8 391 aa18.25■□□□□ 0.51
RAPGEF3-211ENST00000488250 ADAMTS3O15072 1205 aa18.24■□□□□ 0.51
RAPGEF3-211ENST00000488250 FOXN1O15353 648 aa18.24■□□□□ 0.51
RAPGEF3-211ENST00000488250 SLFN14P0C7P3 912 aa18.24■□□□□ 0.51
RAPGEF3-211ENST00000488250 SH3RF1Q7Z6J0 888 aa18.24■□□□□ 0.51
RAPGEF3-211ENST00000488250 PYM1Q9BRP8 204 aaKnown RBP18.24■□□□□ 0.51
RAPGEF3-211ENST00000488250 EHD4Q9H223 541 aa18.24■□□□□ 0.51
RAPGEF3-211ENST00000488250 NRBP1Q9UHY1 535 aa18.24■□□□□ 0.51
RAPGEF3-211ENST00000488250 NEMFO60524 1076 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 CRKP46108 304 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 MYL5Q02045 173 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 C4orf32Q8N8J7 132 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 CCDC12Q8WUD4 166 aaPredicted RBP18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 C7orf43Q8WVR3 580 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 SYMPKQ92797 1274 aaKnown RBP18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 ZMYND12Q9H0C1 365 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 MAN1B1Q9UKM7 699 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 PYCARDQ9ULZ3 195 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 ZNF646O15015 1829 aaPredicted RBP18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 SNHG28P0DPA3 235 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 BMP6P22004 513 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 SCNN1DP51172 638 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 MORC3Q14149 939 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 DACT2Q5SW24 774 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 CC2D2BQ6DHV5 1058 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 HEATR3Q7Z4Q2 680 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 MLKLQ8NB16 471 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 SMARCE1Q969G3 411 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 EPSTI1Q96J88 318 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 HSD3B7Q9H2F3 369 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 PCDHA6Q9UN73 950 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 PCDHA8Q9Y5H6 950 aa18.23■□□□□ 0.51
RAPGEF3-211ENST00000488250 hCG_1984214I3L0E3 225 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 NPM3O75607 178 aaKnown RBP18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 PRR29P0C7W0 189 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 GOLGA8HP0CJ92 632 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 CCDC144BQ3MJ40 725 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 CT47A1Q5JQC4 288 aaPredicted RBP18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 USP17L2Q6R6M4 530 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 ZNF713Q8N859 430 aaPredicted RBP18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 RRP36Q96EU6 259 aaKnown RBP18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 DBNDD1Q9H9R9 158 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 IMPACTQ9P2X3 320 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 DACH1Q9UI36 760 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 ADAMTSL1Q8N6G6 1762 aa18.22■□□□□ 0.51
RAPGEF3-211ENST00000488250 A0A087X0B3 334 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 CCDC194A0A1B0GVG4 234 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 SMC2O95347 1197 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 HLA-DOAP06340 250 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 PDHBP11177 359 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 AKR1B1P15121 316 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 SHMT1P34896 483 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 ASPRV1Q53RT3 343 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 ISM2Q6H9L7 571 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 PDILTQ8N807 584 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 GREB1LQ9C091 1923 aaPredicted RBP18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 ESYT2A0FGR8 921 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 VWA3AA6NCI4 1184 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 ECE2O60344 883 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 MCM7P33993 719 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 LONP1P36776 959 aaKnown RBP18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
RAPGEF3-211ENST00000488250 MYH8P13535 1937 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 USP17L5A8MUK1 530 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 LAD1O00515 517 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 TTLL1O95922 423 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 IL17AQ16552 155 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 CACTINQ8WUQ7 758 aaKnown RBP18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 DHX58Q96C10 678 aa18.2■□□□□ 0.5
RAPGEF3-211ENST00000488250 PAGE5Q96GU1 130 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms