RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.11
COPS7B-221ENST00000488111 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.11
COPS7B-221ENST00000488111 APOA5Q6Q788 366 aa15.71■□□□□ 0.11
COPS7B-221ENST00000488111 CDC37L1Q7L3B6 337 aa15.71■□□□□ 0.11
COPS7B-221ENST00000488111 SGMS1Q86VZ5 419 aa15.71■□□□□ 0.11
COPS7B-221ENST00000488111 SLC12A7Q9Y666 1083 aa15.71■□□□□ 0.11
COPS7B-221ENST00000488111 KIF2AO00139 706 aaPredicted RBP15.7■□□□□ 0.1
COPS7B-221ENST00000488111 AKR1B1P15121 316 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 MMP14P50281 582 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 HIRAP54198 1017 aaPredicted RBP15.7■□□□□ 0.1
COPS7B-221ENST00000488111 CCZ1BP86790 482 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 CCZ1P86791 482 aaPredicted RBP15.7■□□□□ 0.1
COPS7B-221ENST00000488111 IQCB1Q15051 598 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 CHMP4CQ96CF2 233 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 TRIM34Q9BYJ4 488 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 JAK2O60674 1132 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 SKILP12757 684 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 RASA3Q14644 834 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 ARID5BQ14865 1188 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 SHROOM1Q2M3G4 852 aaPredicted RBP15.7■□□□□ 0.1
COPS7B-221ENST00000488111 CCAR2Q8N163 923 aaKnown RBP15.7■□□□□ 0.1
COPS7B-221ENST00000488111 EHD4Q9H223 541 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 SWAP70Q9UH65 585 aa15.7■□□□□ 0.1
COPS7B-221ENST00000488111 ZBTB43O43298 467 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 PDCP20941 246 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 DPY19L2Q6NUT2 758 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 MIGA2Q7L4E1 593 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 FOXP4Q8IVH2 680 aaPredicted RBP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 LEO1Q8WVC0 666 aaPredicted RBP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 MTA3Q9BTC8 594 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 L2HGDHQ9H9P8 463 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 GOLGA6L4A6NEF3 574 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 MPHOSPH10O00566 681 aaKnown RBP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 ADD1P35611 737 aaKnown RBP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 ANGEL2Q5VTE6 544 aaKnown RBP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 FKBP1CQ5VVH2 108 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 RCSD1Q6JBY9 416 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 FAM173BQ6P4H8 233 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 CLEC10AQ8IUN9 316 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 TMTC2Q8N394 836 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 NEDD1Q8NHV4 660 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 DDX11Q96FC9 970 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 SPATA32Q96LK8 384 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.69■□□□□ 0.1
COPS7B-221ENST00000488111 STX8Q9UNK0 236 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 FHOD1Q9Y613 1164 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 ATRNL1Q5VV63 1379 aa15.69■□□□□ 0.1
COPS7B-221ENST00000488111 CTDNEP1O95476 244 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 CDC27P30260 824 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 FERMT3Q86UX7 667 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 FAM83AQ86UY5 434 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 ZNF654Q8IZM8 581 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.68■□□□□ 0.1
COPS7B-221ENST00000488111 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 NR1I2O75469 434 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 HNRNPH2P55795 449 aaKnown RBP15.68■□□□□ 0.1
COPS7B-221ENST00000488111 CEP95Q96GE4 821 aa15.68■□□□□ 0.1
COPS7B-221ENST00000488111 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.68■□□□□ 0.1
COPS7B-221ENST00000488111 GOLGA8AA7E2F4 631 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 GDF11O95390 407 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 TNNI2P48788 182 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 CERKLQ49MI3 558 aaPredicted RBP15.67■□□□□ 0.1
COPS7B-221ENST00000488111 PRAMEF18Q5VWM3 479 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 RRP1BQ14684 758 aaKnown RBP15.67■□□□□ 0.1
COPS7B-221ENST00000488111 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
COPS7B-221ENST00000488111 PGBD1Q96JS3 809 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 DEFB129Q9H1M3 183 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 FAM217BQ9NTX9 383 aaPredicted RBP15.67■□□□□ 0.1
COPS7B-221ENST00000488111 TCP11L1Q9NUJ3 509 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 GGA3Q9NZ52 723 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 PGAP2Q9UHJ9 254 aa15.67■□□□□ 0.1
COPS7B-221ENST00000488111 GOLGA6L19H0YKK7 550 aa15.66■□□□□ 0.1
COPS7B-221ENST00000488111 TNFAIP1Q13829 316 aa15.66■□□□□ 0.1
COPS7B-221ENST00000488111 CATIPQ7Z7H3 387 aa15.66■□□□□ 0.1
COPS7B-221ENST00000488111 DGKHQ86XP1 1220 aa15.66■□□□□ 0.1
COPS7B-221ENST00000488111 CMTR1Q8N1G2 835 aaKnown RBP15.66■□□□□ 0.1
COPS7B-221ENST00000488111 CPLX1O14810 134 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 PLA2G4AP47712 749 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 TATDN1Q6P1N9 297 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 METTL16Q86W50 562 aaKnown RBP15.65■□□□□ 0.1
COPS7B-221ENST00000488111 CCDC82Q8N4S0 544 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 TMEM47Q9BQJ4 181 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 KAT14Q9H8E8 782 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 ADARB2Q9NS39 739 aaKnown RBP15.65■□□□□ 0.1
COPS7B-221ENST00000488111 FEZ2Q9UHY8 353 aaPredicted RBP15.65■□□□□ 0.1
COPS7B-221ENST00000488111 SIPA1L1O43166 1804 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 PTPDC1A2A3K4 754 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 CLCN6P51797 869 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 JAG1P78504 1218 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 FANCBQ8NB91 859 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 TEPSINQ96N21 525 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 TRMT1Q9NXH9 659 aaKnown RBP15.65■□□□□ 0.1
COPS7B-221ENST00000488111 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
COPS7B-221ENST00000488111 PNMA6AP0CW24 399 aaPredicted RBP15.64■□□□□ 0.09
COPS7B-221ENST00000488111 ATP2B2Q01814 1243 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms