RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 CLASRPQ8N2M8 674 aaKnown RBP9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 NSUN4Q96CB9 384 aaKnown RBP9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 DNAJC2Q99543 621 aaKnown RBP9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 LRRCC1Q9C099 1032 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 DEFB129Q9H1M3 183 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 GDPD2Q9HCC8 539 aa9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 GBA2Q9HCG7 927 aaPredicted RBP9.5□□□□□ -0.89
NECTIN3-209ENST00000488016 PDE4DIPQ5VU43 2346 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 UBE2Q2LH0YL09 131 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 AOC2O75106 756 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 MAP4K4O95819 1239 aaPredicted RBP9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 ABL2P42684 1182 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 BTDP43251 543 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 HUNKP57058 714 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 TCP10Q12799 353 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 IRF5Q13568 498 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 HHIPL2Q6UWX4 724 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 SV2AQ7L0J3 742 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 SAPCD2Q86UD0 394 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 APOBEC3FQ8IUX4 373 aaKnown RBP9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 VWA5B2Q8N398 1253 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 ZDHHC15Q96MV8 337 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 MCOLN1Q9GZU1 580 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 BOLA2Q9H3K6 86 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 MAST2Q6P0Q8 1798 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 MROH7-TTC4A0A0A0MT08 1334 aa9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 PDS5AQ29RF7 1337 aaKnown RBP9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 WDR33Q9C0J8 1336 aaKnown RBP9.49□□□□□ -0.89
NECTIN3-209ENST00000488016 RASSF10A6NK89 507 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 GOLIM4O00461 696 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 MYO1BO43795 1136 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 IDH1O75874 414 aaKnown RBP9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 RHOQP17081 205 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 DYNLL1P63167 89 aaKnown RBP9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 MAP2K1Q02750 393 aaPredicted RBP9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 TEPSINQ96N21 525 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 OSBPL3Q9H4L5 887 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 ARHGEF10LQ9HCE6 1279 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 DDX4Q9NQI0 724 aaKnown RBP9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 LRP2BPQ9P2M1 347 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 SUGT1Q9Y2Z0 365 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 GAKO14976 1311 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 MAST3O60307 1309 aa9.48□□□□□ -0.89
NECTIN3-209ENST00000488016 DOCK2Q92608 1830 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 OTOFQ9HC10 1997 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 TRAK2O60296 914 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 VAC14Q08AM6 782 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 CLN3Q13286 438 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 PICALMQ13492 652 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 MCM6Q14566 821 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 SLC4A8Q2Y0W8 1093 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 ANKRD45Q5TZF3 282 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 ZGPATQ8N5A5 531 aaKnown RBP9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 GPR161Q8N6U8 529 aaKnown RBP9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 MAGEB6Q8N7X4 407 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 MIGA1Q8NAN2 632 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 SH3RF3Q8TEJ3 882 aaPredicted RBP9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 CLMNQ96JQ2 1002 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 ZNF512BQ96KM6 892 aaPredicted RBP9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 CAPNS2Q96L46 248 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 CNTNAP3BQ96NU0 1288 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 CNTNAP3Q9BZ76 1288 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 AATFQ9NY61 560 aaKnown RBP eCLIP9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 DOLKQ9UPQ8 538 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 RFX7Q2KHR2 1363 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
NECTIN3-209ENST00000488016 WDHD1O75717 1129 aaPredicted RBP9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 RGS3P49796 1198 aa9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 RHBDL3P58872 404 aa9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 HDAC1Q13547 482 aaPredicted RBP9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 SPTY2D1Q68D10 685 aaPredicted RBP9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 NAA16Q6N069 864 aaPredicted RBP9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 MIGA2Q7L4E1 593 aa9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 RNF135Q8IUD6 432 aa9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 C2orf69Q8N8R5 385 aa9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 LNPKQ9C0E8 428 aa9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 ANGEL1Q9UNK9 670 aaKnown RBP9.46□□□□□ -0.9
NECTIN3-209ENST00000488016 GPR75-ASB3A0A0A6YYF3 556 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 DDTLA6NHG4 134 aaPredicted RBP9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 FAM196BA6NMK8 535 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 FAM155AB1AL88 458 aaPredicted RBP9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 USP2O75604 605 aaPredicted RBP9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 GNRH1P01148 92 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 ATP5JP18859 108 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 CYP7A1P22680 504 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 MMP14P50281 582 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 SKAP1Q86WV1 359 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 RASAL3Q86YV0 1011 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 MRIQ9BWK5 157 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 PAG1Q9NWQ8 432 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 TMOD2Q9NZR1 351 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 SALL3Q9BXA9 1300 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 CDK5RAP2Q96SN8 1893 aa9.45□□□□□ -0.9
NECTIN3-209ENST00000488016 PDE6AP16499 860 aa9.44□□□□□ -0.9
NECTIN3-209ENST00000488016 ZNF157P51786 506 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms