RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 SSTR4P31391 388 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 PRKCQQ04759 706 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 NMIQ13287 307 aaPredicted RBP8.29□□□□□ -1.08
USP48-209ENST00000487880 GAB4Q2WGN9 574 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 CDKAL1Q5VV42 579 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 TMC3Q7Z5M5 1100 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 WFDC3Q8IUB2 231 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 SIRPGQ9P1W8 387 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 VAV3Q9UKW4 847 aa8.29□□□□□ -1.08
USP48-209ENST00000487880 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 EPHX1P07099 455 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 CD247P20963 164 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
USP48-209ENST00000487880 BCL7CQ8WUZ0 217 aaPredicted RBP8.28□□□□□ -1.08
USP48-209ENST00000487880 HRASLS5Q96KN8 279 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 HDAC8Q9BY41 377 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 GP6Q9HCN6 339 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 ZNF451Q9Y4E5 1061 aa8.28□□□□□ -1.08
USP48-209ENST00000487880 H3BS24 57 aa8.27□□□□□ -1.09
USP48-209ENST00000487880 DDAH1O94760 285 aa8.27□□□□□ -1.09
USP48-209ENST00000487880 ZNF143P52747 638 aaPredicted RBP8.27□□□□□ -1.09
USP48-209ENST00000487880 NFXL1Q6ZNB6 911 aa8.27□□□□□ -1.09
USP48-209ENST00000487880 TSPYL5Q86VY4 417 aaPredicted RBP8.27□□□□□ -1.09
USP48-209ENST00000487880 STK11IPQ8N1F8 1099 aa8.27□□□□□ -1.09
USP48-209ENST00000487880 ZNF513Q8N8E2 541 aaPredicted RBP8.27□□□□□ -1.09
USP48-209ENST00000487880 SYTL5Q8TDW5 730 aaPredicted RBP8.27□□□□□ -1.09
USP48-209ENST00000487880 TRIT1Q9H3H1 467 aaKnown RBP8.27□□□□□ -1.09
USP48-209ENST00000487880 ST7Q9NRC1 585 aa8.27□□□□□ -1.09
USP48-209ENST00000487880 GPATCH2Q9NW75 528 aa8.27□□□□□ -1.09
USP48-209ENST00000487880 USP35Q9P2H5 1018 aa8.27□□□□□ -1.09
USP48-209ENST00000487880 ANKRD34BA5PLL1 514 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 PRAMEF1O95521 474 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 ZNF445P59923 1031 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 LRP8Q14114 963 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 AOC3Q16853 763 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 HEATR6Q6AI08 1181 aaKnown RBP8.26□□□□□ -1.09
USP48-209ENST00000487880 VSIG10LQ86VR7 867 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 PMFBP1Q8TBY8 1022 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 ASB11Q8WXH4 323 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 CCDC39Q9UFE4 941 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 FHOD1Q9Y613 1164 aa8.26□□□□□ -1.09
USP48-209ENST00000487880 A0A087WZG4 1122 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 U2SURPO15042 1029 aaKnown RBP8.25□□□□□ -1.09
USP48-209ENST00000487880 IGSF3O75054 1194 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 UBE2FQ969M7 185 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 MKL1Q969V6 931 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 LNPKQ9C0E8 428 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 ASCC2Q9H1I8 757 aaPredicted RBP8.25□□□□□ -1.09
USP48-209ENST00000487880 ATP13A1Q9HD20 1204 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 GFOD1Q9NXC2 390 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 WHRNQ9P202 907 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 ZSWIM5Q9P217 1185 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 FBXL21Q9UKT6 434 aa8.25□□□□□ -1.09
USP48-209ENST00000487880 WASH4PA8MWX3 477 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 SUSD5O60279 629 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 ITGA4P13612 1032 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 RASA3Q14644 834 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 TCEAL1Q15170 157 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 EEPD1Q7L9B9 569 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 TMPRSS7Q7RTY8 843 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 SPRED2Q7Z698 418 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 ZNF655Q8N720 491 aaPredicted RBP8.24□□□□□ -1.09
USP48-209ENST00000487880 CCDC113Q9H0I3 377 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 GBP3Q9H0R5 595 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 OSBPL2Q9H1P3 480 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 CHST7Q9NS84 486 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 SLC5A6Q9Y289 635 aa8.24□□□□□ -1.09
USP48-209ENST00000487880 ADAMTS4O75173 837 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 NAT2P11245 290 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 TPP2P29144 1249 aaPredicted RBP8.23□□□□□ -1.09
USP48-209ENST00000487880 CTSKP43235 329 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 BNIP3Q12983 259 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 RCC1LQ96I51 464 aaKnown RBP8.23□□□□□ -1.09
USP48-209ENST00000487880 EPN3Q9H201 632 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 PCMTD2Q9NV79 361 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 APEX2Q9UBZ4 518 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 MINPP1Q9UNW1 487 aa8.23□□□□□ -1.09
USP48-209ENST00000487880 HYAL3O43820 417 aaPredicted RBP8.22□□□□□ -1.09
USP48-209ENST00000487880 ESR1P03372 595 aa8.22□□□□□ -1.09
USP48-209ENST00000487880 CD96P40200 585 aa8.22□□□□□ -1.09
USP48-209ENST00000487880 RASGRF1Q13972 1273 aa8.22□□□□□ -1.09
USP48-209ENST00000487880 CLEC16AQ2KHT3 1053 aa8.22□□□□□ -1.09
USP48-209ENST00000487880 SLC10A6Q3KNW5 377 aa8.22□□□□□ -1.09
USP48-209ENST00000487880 ST13P5Q8NFI4 369 aaPredicted RBP8.22□□□□□ -1.09
USP48-209ENST00000487880 FGD4Q96M96 766 aa8.22□□□□□ -1.09
USP48-209ENST00000487880 SNTG2Q9NY99 539 aa8.22□□□□□ -1.09
USP48-209ENST00000487880 PPM1BO75688 479 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 CD8BP10966 210 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 ARTNQ5T4W7 220 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 ZNF574Q6ZN55 896 aaPredicted RBP8.21□□□□□ -1.1
USP48-209ENST00000487880 DPH6Q7L8W6 267 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 ARHGEF39Q8N4T4 335 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 FIBCD1Q8N539 461 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 BRF1Q92994 677 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 ZNF669Q96BR6 464 aaPredicted RBP8.21□□□□□ -1.1
USP48-209ENST00000487880 TCTN2Q96GX1 697 aa8.21□□□□□ -1.1
USP48-209ENST00000487880 DEPDC7Q96QD5 511 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms