RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 CDH24Q86UP0 819 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 RELL1Q8IUW5 271 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 TMEM87BQ96K49 555 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 HSPA12BQ96MM6 686 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 BCL2L13Q9BXK5 485 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 CORINQ9Y5Q5 1042 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 TACC3Q9Y6A5 838 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 CLIP1P30622 1438 aa7.59□□□□□ -1.19
BRCA1-217ENST00000487825 JCADQ9P266 1359 aa7.59□□□□□ -1.2
BRCA1-217ENST00000487825 MINDY4BA8MYZ0 360 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 BPNT1O95861 308 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 F13A1P00488 732 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 JUNBP17275 347 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-217ENST00000487825 CLCN7P51798 805 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 FAM160A1Q05DH4 1040 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 DIEXFQ68CQ4 756 aaKnown RBP7.58□□□□□ -1.2
BRCA1-217ENST00000487825 ZNF772Q68DY9 489 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-217ENST00000487825 MRPL41Q8IXM3 137 aaKnown RBP7.58□□□□□ -1.2
BRCA1-217ENST00000487825 MFSD4AQ8N468 514 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 TMEM74Q96NL1 305 aa7.58□□□□□ -1.2
BRCA1-217ENST00000487825 PITPNM2Q9BZ72 1349 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 CILPO75339 1184 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 PAPLNO95428 1278 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 LMNB2Q03252 620 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 ZP2Q05996 745 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 SLC6A19Q695T7 634 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 CCDC84Q86UT8 332 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-217ENST00000487825 MCATQ8IVS2 390 aaKnown RBP7.57□□□□□ -1.2
BRCA1-217ENST00000487825 THEMISQ8N1K5 641 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-217ENST00000487825 LRRN4CLQ8ND94 238 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-217ENST00000487825 ASIC4Q96FT7 647 aa7.57□□□□□ -1.2
BRCA1-217ENST00000487825 TIAM1Q13009 1591 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 FAM221AA4D161 298 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 UPK3BL1B0FP48 263 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 UPK3BL2E5RIL1 263 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 H3BS24 57 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 ZNF865P0CJ78 1059 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-217ENST00000487825 PLCG1P19174 1290 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 ZNF746Q6NUN9 644 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-217ENST00000487825 SLC23A3Q6PIS1 610 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 GATAD2BQ8WXI9 593 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 RHOVQ96L33 236 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 RSRP1Q9BUV0 290 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 ATP13A1Q9HD20 1204 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 CAPN6Q9Y6Q1 641 aa7.56□□□□□ -1.2
BRCA1-217ENST00000487825 RGS12O14924 1447 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 FGD6Q6ZV73 1430 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 BIN1O00499 593 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 CYP7A1P22680 504 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 ITGAEP38570 1179 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 SNAP47Q5SQN1 464 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 GGT6Q6P531 493 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 GOLM1Q8NBJ4 401 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 SEMA3GQ9NS98 782 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 ADAM30Q9UKF2 790 aa7.55□□□□□ -1.2
BRCA1-217ENST00000487825 MIA2Q96PC5 1412 aa7.54□□□□□ -1.2
BRCA1-217ENST00000487825 GRIN3BO60391 1043 aa7.54□□□□□ -1.2
BRCA1-217ENST00000487825 PWP1Q13610 501 aa7.54□□□□□ -1.2
BRCA1-217ENST00000487825 ZNF326Q5BKZ1 582 aaKnown RBP7.54□□□□□ -1.2
BRCA1-217ENST00000487825 C22orf34Q6ZV56 151 aa7.54□□□□□ -1.2
BRCA1-217ENST00000487825 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-217ENST00000487825 GOLGA2P5Q9HBQ8 144 aa7.54□□□□□ -1.2
BRCA1-217ENST00000487825 COPRSQ9NQ92 184 aa7.54□□□□□ -1.2
BRCA1-217ENST00000487825 KBTBD4Q9NVX7 518 aa7.54□□□□□ -1.2
BRCA1-217ENST00000487825 CDK11AQ9UQ88 783 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-217ENST00000487825 SCAF11Q99590 1463 aaKnown RBP7.54□□□□□ -1.2
BRCA1-217ENST00000487825 KDM5AP29375 1690 aaKnown RBP7.54□□□□□ -1.2
BRCA1-217ENST00000487825 SPAG9O60271 1321 aaKnown RBP7.53□□□□□ -1.2
BRCA1-217ENST00000487825 SPATA31A6Q5VVP1 1343 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 AHDC1Q5TGY3 1603 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-217ENST00000487825 CFAP65Q6ZU64 1925 aaKnown RBP7.53□□□□□ -1.2
BRCA1-217ENST00000487825 TNK2Q07912 1038 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 FAM13CQ8NE31 585 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 FBXO27Q8NI29 283 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 CARS2Q9HA77 564 aaKnown RBP7.53□□□□□ -1.2
BRCA1-217ENST00000487825 ZSWIM5Q9P217 1185 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 ST14Q9Y5Y6 855 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 NWD1Q149M9 1564 aa7.53□□□□□ -1.2
BRCA1-217ENST00000487825 FMN1Q68DA7 1419 aa7.52□□□□□ -1.2
BRCA1-217ENST00000487825 SLIT1O75093 1534 aa7.52□□□□□ -1.2
BRCA1-217ENST00000487825 DIP2AQ14689 1571 aa7.52□□□□□ -1.21
BRCA1-217ENST00000487825 ARHGAP23Q9P227 1491 aa7.52□□□□□ -1.21
BRCA1-217ENST00000487825 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
BRCA1-217ENST00000487825 ETV3P41162 512 aa7.52□□□□□ -1.21
BRCA1-217ENST00000487825 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
BRCA1-217ENST00000487825 CEP131Q9UPN4 1083 aa7.52□□□□□ -1.21
BRCA1-217ENST00000487825 ABCC3O15438 1527 aa7.52□□□□□ -1.21
BRCA1-217ENST00000487825 TMEM94Q12767 1356 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 ZBTB7CA1YPR0 619 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 KIR3DL1P43629 444 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 RANGAP1P46060 587 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-217ENST00000487825 YARSP54577 528 aaKnown RBP7.51□□□□□ -1.21
BRCA1-217ENST00000487825 TMCO4Q5TGY1 634 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 OGFOD2Q6N063 350 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 ERMP1Q7Z2K6 904 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
BRCA1-217ENST00000487825 FAM168AQ92567 244 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 573.7 ms