RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SUGCTQ9HAC7 445 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 TMEM39AQ9NV64 488 aa5.53□□□□□ -1.52
RTN4-213ENST00000485749 CTDP1Q9Y5B0 961 aaPredicted RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.53□□□□□ -1.52
RTN4-213ENST00000485749 ARID1BQ8NFD5 2236 aaPredicted RBP5.52□□□□□ -1.53
RTN4-213ENST00000485749 CCDC163A0A0D9SF12 145 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 FAM95CA0A1B0GW59 222 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 NFKBIEO00221 500 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 CBFA2T2O43439 604 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 TIMM44O43615 452 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 ATE1O95260 518 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 LDHAP00338 332 aaKnown RBP5.52□□□□□ -1.53
RTN4-213ENST00000485749 ACPPP15309 386 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 MCM4P33991 863 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 SSR1P43307 286 aaKnown RBP5.52□□□□□ -1.53
RTN4-213ENST00000485749 USP11P51784 963 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 IRX3P78415 501 aaPredicted RBP5.52□□□□□ -1.53
RTN4-213ENST00000485749 LRRC14Q15048 493 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 MTERF2Q49AM1 385 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 TBC1D10BQ4KMP7 808 aaPredicted RBP5.52□□□□□ -1.53
RTN4-213ENST00000485749 ODR4Q5SWX8 454 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 EFCAB2Q5VUJ9 269 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 REC114Q7Z4M0 266 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 SMG8Q8ND04 991 aaKnown RBP5.52□□□□□ -1.53
RTN4-213ENST00000485749 NXPE3Q969Y0 559 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 RUNDC1Q96C34 613 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 C8orf48Q96LL4 319 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 ST7Q9NRC1 585 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 ABCF2Q9UG63 623 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 ADGRE2Q9UHX3 823 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 NOL7Q9UMY1 257 aaKnown RBP5.52□□□□□ -1.53
RTN4-213ENST00000485749 MYO15BQ96JP2 1530 aa5.52□□□□□ -1.53
RTN4-213ENST00000485749 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 TRIM37O94972 964 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 FOSP01100 380 aaPredicted RBP5.51□□□□□ -1.53
RTN4-213ENST00000485749 CYP27A1Q02318 531 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 NFKBIBQ15653 356 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 MAPRE1Q15691 268 aaKnown RBP5.51□□□□□ -1.53
RTN4-213ENST00000485749 LRRFIP1Q32MZ4 808 aaKnown RBP5.51□□□□□ -1.53
RTN4-213ENST00000485749 HSP90AB3PQ58FF7 597 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 EXOSC6Q5RKV6 272 aaKnown RBP5.51□□□□□ -1.53
RTN4-213ENST00000485749 PPP4R4Q6NUP7 873 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 BNC2Q6ZN30 1099 aaPredicted RBP5.51□□□□□ -1.53
RTN4-213ENST00000485749 RPAINQ86UA6 219 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 ZSWIM2Q8NEG5 633 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 NEUROD6Q96NK8 337 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 MYCBPQ99417 103 aaPredicted RBP5.51□□□□□ -1.53
RTN4-213ENST00000485749 IFT122Q9HBG6 1241 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 ISY1Q9ULR0 285 aaKnown RBP5.51□□□□□ -1.53
RTN4-213ENST00000485749 SOX13Q9UN79 622 aa5.51□□□□□ -1.53
RTN4-213ENST00000485749 KIF3BO15066 747 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 TLR3O15455 904 aaKnown RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 CYP26A1O43174 497 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 CAND2O75155 1236 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 PAGE1O75459 146 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 TRPA1O75762 1119 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 BPNT1O95861 308 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 PRNPP04156 253 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 FAM200BP0CF97 657 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 JUNBP17275 347 aaPredicted RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 BMP6P22004 513 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 NME2P22392 152 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 FAAP100Q0VG06 881 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 KCTD2Q14681 263 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 PPP2R5AQ15172 486 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 MAP9Q49MG5 647 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 DALRD3Q5D0E6 543 aaKnown RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 GJC2Q5T442 439 aaPredicted RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 FBXW10Q5XX13 1052 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 CC2D1AQ6P1N0 951 aaPredicted RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 FERMT3Q86UX7 667 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 LSRQ86X29 649 aaPredicted RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 WDR75Q8IWA0 830 aaKnown RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 TP53INP2Q8IXH6 220 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 FBXL6Q8N531 539 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 TAB3Q8N5C8 712 aaPredicted RBP5.5□□□□□ -1.53
RTN4-213ENST00000485749 ATL2Q8NHH9 583 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 FBXO27Q8NI29 283 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 ASAP3Q8TDY4 903 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 RELTQ969Z4 430 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 HHIPQ96QV1 700 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 USP26Q9BXU7 913 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 EMILIN2Q9BXX0 1053 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 TMPRSS13Q9BYE2 586 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 BRMS1Q9HCU9 246 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 HOMER2Q9NSB8 354 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 SLC12A7Q9Y666 1083 aa5.5□□□□□ -1.53
RTN4-213ENST00000485749 KDM2BQ8NHM5 1336 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 CCDC180Q9P1Z9 1646 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 ADAMTS4O75173 837 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 GJB6O95452 261 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 KRT18P05783 430 aaKnown RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 CT47B1P0C2W7 299 aaPredicted RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 HCLS1P14317 486 aaPredicted RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 PMLP29590 882 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 ANP32AP39687 249 aaKnown RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 TNNT2P45379 298 aaPredicted RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 TERF1P54274 439 aa5.49□□□□□ -1.53
RTN4-213ENST00000485749 EXOSC10Q01780 885 aaKnown RBP5.49□□□□□ -1.53
RTN4-213ENST00000485749 CLCQ05315 142 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms