RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 CCNA1P78396 465 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 SEPT2Q15019 361 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-215ENST00000485550 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 TRIM43Q96BQ3 446 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-215ENST00000485550 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-215ENST00000485550 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 RABGAP1Q9Y3P9 1069 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 IVNS1ABPQ9Y6Y0 642 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 MYH8P13535 1937 aa12.77□□□□□ -0.37
HMGN1-215ENST00000485550 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 SMIM22K7EJ46 135 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 ATP5JP18859 108 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP14P54578 494 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 GABPAQ06546 454 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L24Q0WX57 530 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 GRIN2CQ14957 1233 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 SLC44A5Q8NCS7 719 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 ARRDC4Q8NCT1 418 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 FERMT2Q96AC1 680 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 RNPC3Q96LT9 517 aaKnown RBP12.76□□□□□ -0.37
HMGN1-215ENST00000485550 KIAA1683Q9H0B3 1180 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
HMGN1-215ENST00000485550 CYP2D7A0A087X1C5 515 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 MBD4O95243 580 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 HOXC6P09630 235 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 VCAM1P19320 739 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 ITGB8P26012 769 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 ADD2P35612 726 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 ADCYAP1R1P41586 468 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 GRB14Q14449 540 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 C12orf42Q96LP6 360 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 HAUS7Q99871 368 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 LRRCC1Q9C099 1032 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
HMGN1-215ENST00000485550 TRPC6Q9Y210 931 aa12.75□□□□□ -0.37
HMGN1-215ENST00000485550 PARP14Q460N5 1801 aa12.74□□□□□ -0.37
HMGN1-215ENST00000485550 A0A1W2PRG0 241 aa12.74□□□□□ -0.37
HMGN1-215ENST00000485550 EPHB4P54760 987 aa12.74□□□□□ -0.37
HMGN1-215ENST00000485550 SNX17Q15036 470 aa12.74□□□□□ -0.37
HMGN1-215ENST00000485550 DPP9Q86TI2 863 aa12.74□□□□□ -0.37
HMGN1-215ENST00000485550 CLEC10AQ8IUN9 316 aa12.74□□□□□ -0.37
HMGN1-215ENST00000485550 PPM1EQ8WY54 764 aa12.74□□□□□ -0.37
HMGN1-215ENST00000485550 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGN1-215ENST00000485550 TMEM265A0A087WTH1 108 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 MAP3K13O43283 966 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 TLE2Q04725 743 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 LRRC41Q15345 812 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 TSHZ3Q63HK5 1081 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
HMGN1-215ENST00000485550 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 USP17L21D6R901 530 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 IGHA2P01877 340 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 AKR1B1P15121 316 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 DNAJB2P25686 324 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 ADORA2AP29274 412 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 KIAA1755Q5JYT7 1200 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 SLC39A7Q92504 469 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 PUS7LQ9H0K6 701 aaKnown RBP12.72□□□□□ -0.37
HMGN1-215ENST00000485550 ATP8A2Q9NTI2 1148 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 SWAP70Q9UH65 585 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 MCM3APO60318 1980 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
HMGN1-215ENST00000485550 SEPT4O43236 478 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 CLTBP09497 229 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 C7P10643 843 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 CDK8P49336 464 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 UBE3CQ15386 1083 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 C12orf60Q5U649 245 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 LBX2Q6XYB7 198 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 TMEM179Q6ZVK1 233 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 SIAH1Q8IUQ4 282 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 SPICE1Q8N0Z3 855 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 STK11IPQ8N1F8 1099 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 TANGO6Q9C0B7 1094 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 ZNF576Q9H609 170 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 ECHDC1Q9NTX5 307 aa12.71□□□□□ -0.37
HMGN1-215ENST00000485550 COBLO75128 1261 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 RAG1P15918 1043 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 PLA2G5P39877 138 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
HMGN1-215ENST00000485550 COG2Q14746 738 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 C1orf53Q5VUE5 145 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms