RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 MOV10L1Q9BXT6 1211 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-210ENST00000485122 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-210ENST00000485122 PRKAG3Q9UGI9 489 aa12.59□□□□□ -0.39
EXOSC1-210ENST00000485122 MROH5Q6ZUA9 1318 aa12.59□□□□□ -0.39
EXOSC1-210ENST00000485122 ACACBO00763 2458 aa12.59□□□□□ -0.39
EXOSC1-210ENST00000485122 DNAH14Q0VDD8 3507 aa12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 SPDYE16A6NNV3 312 aaPredicted RBP12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 ZNF865P0CJ78 1059 aaPredicted RBP12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 PUS10Q3MIT2 529 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 EP400NLQ6ZTU2 488 aa12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 NOC4LQ9BVI4 516 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 SUGCTQ9HAC7 445 aa12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 LMCD1Q9NZU5 365 aa12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 ELP1O95163 1332 aa12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 COL11A1P12107 1806 aaPredicted RBP12.58□□□□□ -0.4
EXOSC1-210ENST00000485122 ASGR1P07306 291 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 AKR1A1P14550 325 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 ERCC3P19447 782 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 AVPR2P30518 371 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 NBL1P41271 181 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 PKN1Q16512 942 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 DEFB128Q7Z7B8 93 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 HERC6Q8IVU3 1022 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 LINS1Q8NG48 757 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 IRF2BPLQ9H1B7 796 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 DNAJC18Q9H819 358 aa12.57□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 ASNSP08243 561 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 RHBDL3P58872 404 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 FRMD5Q7Z6J6 570 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 TMCO2Q7Z6W1 182 aaPredicted RBP12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
EXOSC1-210ENST00000485122 ATG2AQ2TAZ0 1938 aa12.55□□□□□ -0.4
EXOSC1-210ENST00000485122 PDE8BO95263 885 aa12.55□□□□□ -0.4
EXOSC1-210ENST00000485122 LBX2Q6XYB7 198 aa12.55□□□□□ -0.4
EXOSC1-210ENST00000485122 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
EXOSC1-210ENST00000485122 DNAAF4Q8WXU2 420 aa12.55□□□□□ -0.4
EXOSC1-210ENST00000485122 NKD2Q969F2 451 aaPredicted RBP12.55□□□□□ -0.4
EXOSC1-210ENST00000485122 ZBTB21Q9ULJ3 1066 aa12.55□□□□□ -0.4
EXOSC1-210ENST00000485122 DMDP11532 3685 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 RBAK-RBAKDNI3L0D1 243 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 ADCY6O43306 1168 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 VCAM1P19320 739 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 CLUL1Q15846 466 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 RPUSD2Q8IZ73 545 aaKnown RBP12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 NRBP1Q9UHY1 535 aa12.54□□□□□ -0.4
EXOSC1-210ENST00000485122 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 TANC1Q9C0D5 1861 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 STRNO43815 780 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 PDGFBP01127 241 aaPredicted RBP12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 PGK2P07205 417 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 IFIT1P09914 478 aaKnown RBP12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 FGFR2P21802 821 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 DSG3P32926 999 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 ZXDAP98168 799 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 C12orf42Q96LP6 360 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 FEZ1Q99689 392 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 SPATC1LQ9H0A9 340 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 TRPV6Q9H1D0 765 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 FAM50BQ9Y247 325 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 DMXL1Q9Y485 3027 aa12.53□□□□□ -0.4
EXOSC1-210ENST00000485122 B4GALT4O60513 344 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 CST5P28325 142 aaPredicted RBP12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 DZIP1Q86YF9 867 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 KLHDC4Q8TBB5 520 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 MROH7-TTC4A0A0A0MT08 1334 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 SALL1Q9NSC2 1324 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 MCM3APO60318 1980 aa12.52□□□□□ -0.41
EXOSC1-210ENST00000485122 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
EXOSC1-210ENST00000485122 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-210ENST00000485122 FKBP5Q13451 457 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-210ENST00000485122 PUM3Q15397 648 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-210ENST00000485122 ASIC4Q96FT7 647 aa12.51□□□□□ -0.41
EXOSC1-210ENST00000485122 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
EXOSC1-210ENST00000485122 RPAP3Q9H6T3 665 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-210ENST00000485122 FLIIQ13045 1269 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 PLS1Q14651 629 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 PUM1Q14671 1186 aaKnown RBP eCLIP12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 SMAD2Q15796 467 aaKnown RBP12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 KIAA2013Q8IYS2 634 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms