RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 A0A1B0GTL3 188 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 H3BRB1 525 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 BUB1BO60566 1050 aaPredicted RBP6.64□□□□□ -1.35
VPS8-223ENST00000485024 LRRN2O75325 713 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 ACVRL1P37023 503 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 ERVFRD-1P60508 538 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 CAP1Q01518 475 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 PCNX4Q63HM2 1172 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 OLFML2BQ68BL8 750 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 TMC6Q7Z403 805 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 RBM15Q96T37 977 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS8-223ENST00000485024 C1QTNF3Q9BXJ4 246 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 CEP44Q9C0F1 390 aa6.64□□□□□ -1.35
VPS8-223ENST00000485024 TUT1Q9H6E5 874 aaKnown RBP6.64□□□□□ -1.35
VPS8-223ENST00000485024 SHISA3A0PJX4 238 aa6.63□□□□□ -1.35
VPS8-223ENST00000485024 VWA3BQ502W6 1294 aa6.63□□□□□ -1.35
VPS8-223ENST00000485024 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
VPS8-223ENST00000485024 PLCD4Q9BRC7 762 aa6.63□□□□□ -1.35
VPS8-223ENST00000485024 GZF1Q9H116 711 aaPredicted RBP6.63□□□□□ -1.35
VPS8-223ENST00000485024 EGFL7Q9UHF1 273 aa6.63□□□□□ -1.35
VPS8-223ENST00000485024 CEP131Q9UPN4 1083 aa6.63□□□□□ -1.35
VPS8-223ENST00000485024 CYR61O00622 381 aa6.62□□□□□ -1.35
VPS8-223ENST00000485024 ABLIM1O14639 778 aa6.62□□□□□ -1.35
VPS8-223ENST00000485024 CELA3AP09093 270 aa6.62□□□□□ -1.35
VPS8-223ENST00000485024 PNLIPP16233 465 aa6.62□□□□□ -1.35
VPS8-223ENST00000485024 LIMS1P48059 325 aa6.62□□□□□ -1.35
VPS8-223ENST00000485024 TMEM87BQ96K49 555 aa6.62□□□□□ -1.35
VPS8-223ENST00000485024 WDR26Q9H7D7 661 aa6.62□□□□□ -1.35
VPS8-223ENST00000485024 IGFBP6P24592 240 aaPredicted RBP6.61□□□□□ -1.35
VPS8-223ENST00000485024 CNR2P34972 360 aa6.61□□□□□ -1.35
VPS8-223ENST00000485024 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
VPS8-223ENST00000485024 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
VPS8-223ENST00000485024 CITED4Q96RK1 184 aa6.61□□□□□ -1.35
VPS8-223ENST00000485024 KCNH3Q9ULD8 1083 aa6.61□□□□□ -1.35
VPS8-223ENST00000485024 RBM47A0AV96 593 aaKnown RBP6.6□□□□□ -1.35
VPS8-223ENST00000485024 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
VPS8-223ENST00000485024 GLYCTKQ8IVS8 523 aa6.6□□□□□ -1.35
VPS8-223ENST00000485024 DDX1Q92499 740 aaKnown RBP6.6□□□□□ -1.35
VPS8-223ENST00000485024 ALKBH8Q96BT7 664 aaKnown RBP6.6□□□□□ -1.35
VPS8-223ENST00000485024 MAP6Q96JE9 813 aa6.6□□□□□ -1.35
VPS8-223ENST00000485024 GFRA2O00451 464 aa6.59□□□□□ -1.35
VPS8-223ENST00000485024 KIR3DS1Q14943 382 aa6.59□□□□□ -1.35
VPS8-223ENST00000485024 SLC14A2Q15849 920 aa6.59□□□□□ -1.35
VPS8-223ENST00000485024 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS8-223ENST00000485024 SLC6A19Q695T7 634 aa6.59□□□□□ -1.35
VPS8-223ENST00000485024 LSRQ86X29 649 aaPredicted RBP6.59□□□□□ -1.35
VPS8-223ENST00000485024 KIR2DL1P43626 348 aaPredicted RBP6.58□□□□□ -1.36
VPS8-223ENST00000485024 KIR2DL2P43627 348 aaPredicted RBP6.58□□□□□ -1.36
VPS8-223ENST00000485024 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
VPS8-223ENST00000485024 CRIP3Q6Q6R5 217 aa6.58□□□□□ -1.36
VPS8-223ENST00000485024 TMC1Q8TDI8 760 aa6.58□□□□□ -1.36
VPS8-223ENST00000485024 HHIPL1Q96JK4 782 aa6.58□□□□□ -1.36
VPS8-223ENST00000485024 PPM1HQ9ULR3 514 aa6.58□□□□□ -1.36
VPS8-223ENST00000485024 TACC3Q9Y6A5 838 aa6.58□□□□□ -1.36
VPS8-223ENST00000485024 PLA2G1BP04054 148 aaKnown RBP6.57□□□□□ -1.36
VPS8-223ENST00000485024 PGRP06401 933 aa6.57□□□□□ -1.36
VPS8-223ENST00000485024 FBLN1P23142 703 aa6.57□□□□□ -1.36
VPS8-223ENST00000485024 RPL10P27635 214 aaKnown RBP6.57□□□□□ -1.36
VPS8-223ENST00000485024 SPRED1Q7Z699 444 aa6.57□□□□□ -1.36
VPS8-223ENST00000485024 MPOP05164 745 aa6.56□□□□□ -1.36
VPS8-223ENST00000485024 GSTT1P30711 240 aa6.56□□□□□ -1.36
VPS8-223ENST00000485024 WAPLQ7Z5K2 1190 aa6.56□□□□□ -1.36
VPS8-223ENST00000485024 TTC9BQ8N6N2 239 aa6.56□□□□□ -1.36
VPS8-223ENST00000485024 ZMYM5Q9UJ78 669 aa6.56□□□□□ -1.36
VPS8-223ENST00000485024 IRS2Q9Y4H2 1338 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 CARNS1A5YM72 827 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 NOBOXO60393 691 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 SERPINB4P48594 390 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 RAB3GAP1Q15042 981 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 MCATQ8IVS2 390 aaKnown RBP6.55□□□□□ -1.36
VPS8-223ENST00000485024 FNIP1Q8TF40 1166 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 RNF141Q8WVD5 230 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
VPS8-223ENST00000485024 LOXL4Q96JB6 756 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 LNPKQ9C0E8 428 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 PRDM14Q9GZV8 571 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 PCED1AQ9H1Q7 454 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 SUSD2Q9UGT4 822 aa6.55□□□□□ -1.36
VPS8-223ENST00000485024 GNEQ9Y223 722 aaKnown RBP6.55□□□□□ -1.36
VPS8-223ENST00000485024 TMEM82A0PJX8 343 aa6.54□□□□□ -1.36
VPS8-223ENST00000485024 NUDT19A8MXV4 375 aa6.54□□□□□ -1.36
VPS8-223ENST00000485024 CCDC27Q2M243 656 aa6.54□□□□□ -1.36
VPS8-223ENST00000485024 SND1Q7KZF4 910 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS8-223ENST00000485024 NLGN1Q8N2Q7 840 aa6.54□□□□□ -1.36
VPS8-223ENST00000485024 ANKRD24Q8TF21 1146 aa6.54□□□□□ -1.36
VPS8-223ENST00000485024 SAMD11Q96NU1 681 aa6.54□□□□□ -1.36
VPS8-223ENST00000485024 MSL3P1P0C860 447 aa6.53□□□□□ -1.36
VPS8-223ENST00000485024 USHBP1Q8N6Y0 703 aa6.53□□□□□ -1.36
VPS8-223ENST00000485024 SH3RF3Q8TEJ3 882 aaPredicted RBP6.53□□□□□ -1.36
VPS8-223ENST00000485024 ZNF526Q8TF50 670 aaPredicted RBP6.53□□□□□ -1.36
VPS8-223ENST00000485024 CYB5D2Q8WUJ1 264 aa6.53□□□□□ -1.36
VPS8-223ENST00000485024 DMRTB1Q96MA1 342 aa6.53□□□□□ -1.36
VPS8-223ENST00000485024 IVNS1ABPQ9Y6Y0 642 aa6.53□□□□□ -1.36
VPS8-223ENST00000485024 DLX2Q07687 328 aaPredicted RBP6.52□□□□□ -1.37
VPS8-223ENST00000485024 ZPBP2Q6X784 338 aa6.52□□□□□ -1.37
VPS8-223ENST00000485024 RNF111Q6ZNA4 994 aa6.52□□□□□ -1.37
VPS8-223ENST00000485024 SAPCD2Q86UD0 394 aa6.52□□□□□ -1.37
VPS8-223ENST00000485024 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
VPS8-223ENST00000485024 FOXP3Q9BZS1 431 aa6.52□□□□□ -1.37
VPS8-223ENST00000485024 RTP1P59025 263 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms