RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 GLI1P08151 1106 aa10.27□□□□□ -0.77
UBR3-210ENST00000484596 GIPRP48546 466 aa10.27□□□□□ -0.77
UBR3-210ENST00000484596 MLANAQ16655 118 aa10.27□□□□□ -0.77
UBR3-210ENST00000484596 TMEM67Q5HYA8 995 aa10.27□□□□□ -0.77
UBR3-210ENST00000484596 TSPYL5Q86VY4 417 aaPredicted RBP10.27□□□□□ -0.77
UBR3-210ENST00000484596 FAM53CQ9NYF3 392 aa10.27□□□□□ -0.77
UBR3-210ENST00000484596 IGSF3O75054 1194 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 STK10O94804 968 aaKnown RBP10.26□□□□□ -0.77
UBR3-210ENST00000484596 MESP2Q0VG99 397 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 ZNF124Q15973 351 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 CCDC81Q6ZN84 652 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 SHDQ96IW2 340 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 HIRIP3Q9BW71 556 aaPredicted RBP10.26□□□□□ -0.77
UBR3-210ENST00000484596 ADAMTS10Q9H324 1103 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
UBR3-210ENST00000484596 DUSP13Q9UII6 198 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 TMEM59LQ9UK28 342 aa10.26□□□□□ -0.77
UBR3-210ENST00000484596 GBP1P32455 592 aa10.25□□□□□ -0.77
UBR3-210ENST00000484596 GTF2F1P35269 517 aaKnown RBP eCLIP10.25□□□□□ -0.77
UBR3-210ENST00000484596 TNNI3KQ59H18 835 aa10.25□□□□□ -0.77
UBR3-210ENST00000484596 ARSHQ5FYA8 562 aa10.25□□□□□ -0.77
UBR3-210ENST00000484596 VWCEQ96DN2 955 aa10.25□□□□□ -0.77
UBR3-210ENST00000484596 TM9SF2Q99805 663 aa10.25□□□□□ -0.77
UBR3-210ENST00000484596 ASPNQ9BXN1 380 aa10.25□□□□□ -0.77
UBR3-210ENST00000484596 RGS13O14921 159 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 HK2P52789 917 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 ERVFC1P60507 584 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 FZD5Q13467 585 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 SOGA3Q5TF21 947 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 CDCP2Q5VXM1 449 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 INTS3Q68E01 1043 aaKnown RBP10.24□□□□□ -0.77
UBR3-210ENST00000484596 KSR1Q8IVT5 923 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 TAB3Q8N5C8 712 aaPredicted RBP10.24□□□□□ -0.77
UBR3-210ENST00000484596 ANAPC16Q96DE5 110 aa10.24□□□□□ -0.77
UBR3-210ENST00000484596 EGR3Q06889 387 aa10.23□□□□□ -0.77
UBR3-210ENST00000484596 PRR23BQ6ZRT6 265 aa10.23□□□□□ -0.77
UBR3-210ENST00000484596 NLRC3Q7RTR2 1065 aa10.23□□□□□ -0.77
UBR3-210ENST00000484596 ATG4CQ96DT6 458 aa10.23□□□□□ -0.77
UBR3-210ENST00000484596 CNNM2Q9H8M5 875 aa10.23□□□□□ -0.77
UBR3-210ENST00000484596 PCDHA11Q9Y5I1 949 aa10.23□□□□□ -0.77
UBR3-210ENST00000484596 SHISA3A0PJX4 238 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 UBOX5O94941 541 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 RAG1P15918 1043 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 CCNFP41002 786 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 JAG1P78504 1218 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 OVOS1Q6IE37 1185 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 MPZL3Q6UWV2 235 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 LSRQ86X29 649 aaPredicted RBP10.22□□□□□ -0.77
UBR3-210ENST00000484596 C19orf47Q8N9M1 422 aaKnown RBP10.22□□□□□ -0.77
UBR3-210ENST00000484596 ABHD4Q8TB40 342 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 FAM84AQ96KN4 292 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 ZNF408Q9H9D4 720 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 PRKAG3Q9UGI9 489 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 R3HCC1Q9Y3T6 440 aaKnown RBP10.22□□□□□ -0.77
UBR3-210ENST00000484596 SLC12A7Q9Y666 1083 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 MRVI1Q9Y6F6 885 aa10.22□□□□□ -0.77
UBR3-210ENST00000484596 RAC2P15153 192 aa10.21□□□□□ -0.77
UBR3-210ENST00000484596 NME1P15531 152 aaKnown RBP10.21□□□□□ -0.77
UBR3-210ENST00000484596 LTKP29376 864 aa10.21□□□□□ -0.77
UBR3-210ENST00000484596 CHMP4BP1P59074 171 aa10.21□□□□□ -0.77
UBR3-210ENST00000484596 RBL2Q08999 1139 aa10.21□□□□□ -0.77
UBR3-210ENST00000484596 CKAP2LQ8IYA6 745 aa10.21□□□□□ -0.77
UBR3-210ENST00000484596 TNFRSF10CO14798 259 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 HPXP02790 462 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 GUCY2CP25092 1073 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 ETFBP38117 255 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 CASP7P55210 303 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 MYLIPQ8WY64 445 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 DHX38Q92620 1227 aaKnown RBP10.2□□□□□ -0.78
UBR3-210ENST00000484596 SLC38A3Q99624 504 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 ANTXR1Q9H6X2 564 aa10.2□□□□□ -0.78
UBR3-210ENST00000484596 POLR2BP30876 1174 aaKnown RBP10.19□□□□□ -0.78
UBR3-210ENST00000484596 PKN1Q16512 942 aa10.19□□□□□ -0.78
UBR3-210ENST00000484596 NBPF6Q5VWK0 638 aa10.19□□□□□ -0.78
UBR3-210ENST00000484596 NBPF4Q96M43 638 aa10.19□□□□□ -0.78
UBR3-210ENST00000484596 ZGLP1P0C6A0 271 aa10.18□□□□□ -0.78
UBR3-210ENST00000484596 TRHRP34981 398 aaPredicted RBP10.18□□□□□ -0.78
UBR3-210ENST00000484596 CLEC16AQ2KHT3 1053 aa10.18□□□□□ -0.78
UBR3-210ENST00000484596 SP110Q9HB58 689 aa10.18□□□□□ -0.78
UBR3-210ENST00000484596 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBR3-210ENST00000484596 DBX1A6NMT0 343 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 SMAD7O15105 426 aaKnown RBP10.16□□□□□ -0.78
UBR3-210ENST00000484596 RNF4P78317 190 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 NMIQ13287 307 aaPredicted RBP10.16□□□□□ -0.78
UBR3-210ENST00000484596 PPP2R5EQ16537 467 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 NBPF12Q5TAG4 269 aaPredicted RBP10.16□□□□□ -0.78
UBR3-210ENST00000484596 ANKS3Q6ZW76 656 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 PDZD8Q8NEN9 1154 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 DHRS1Q96LJ7 313 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 DIRC2Q96SL1 478 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 ACTR10Q9NZ32 417 aa10.16□□□□□ -0.78
UBR3-210ENST00000484596 TEKQ02763 1124 aa10.15□□□□□ -0.78
UBR3-210ENST00000484596 FAM169BQ8N8A8 192 aa10.15□□□□□ -0.78
UBR3-210ENST00000484596 ASCC2Q9H1I8 757 aaPredicted RBP10.15□□□□□ -0.78
UBR3-210ENST00000484596 NSUN3Q9H649 340 aaKnown RBP10.15□□□□□ -0.78
UBR3-210ENST00000484596 C19orf44Q9H6X5 657 aa10.15□□□□□ -0.78
UBR3-210ENST00000484596 NBPF9Q3BBW0 867 aa10.14□□□□□ -0.79
UBR3-210ENST00000484596 RUFY4Q6ZNE9 571 aa10.14□□□□□ -0.79
UBR3-210ENST00000484596 ENOX1Q8TC92 643 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms