RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 PCDHB12Q9Y5F1 795 aa4.97□□□□□ -1.61
ERCC8-206ENST00000484330 ST14Q9Y5Y6 855 aa4.97□□□□□ -1.61
ERCC8-206ENST00000484330 PITPNM2Q9BZ72 1349 aa4.97□□□□□ -1.61
ERCC8-206ENST00000484330 CNTNAP4Q9C0A0 1308 aa4.97□□□□□ -1.61
ERCC8-206ENST00000484330 A0A1W2PQH9 124 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 H3BS24 57 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 SLC7A5Q01650 507 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 IKZF1Q13422 519 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 NCAPHQ15003 741 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 TCEAL1Q15170 157 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 NBPF9Q3BBW0 867 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 GNPTABQ3T906 1256 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 ANKRD39Q53RE8 183 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 TP53INP2Q8IXH6 220 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 UBE2FQ969M7 185 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 CCDC120Q96HB5 630 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 Q96M66 194 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 HIRIP3Q9BW71 556 aaPredicted RBP4.96□□□□□ -1.62
ERCC8-206ENST00000484330 ZSWIM5Q9P217 1185 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 FBXL21Q9UKT6 434 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 ZNF214Q9UL59 606 aaPredicted RBP4.96□□□□□ -1.62
ERCC8-206ENST00000484330 MRVI1Q9Y6F6 885 aa4.96□□□□□ -1.62
ERCC8-206ENST00000484330 FAM86C2PA6NEL3 165 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 SMAD7O15105 426 aaKnown RBP4.95□□□□□ -1.62
ERCC8-206ENST00000484330 NMIQ13287 307 aaPredicted RBP4.95□□□□□ -1.62
ERCC8-206ENST00000484330 AUHQ13825 339 aaKnown RBP4.95□□□□□ -1.62
ERCC8-206ENST00000484330 FXNQ16595 210 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 SOGA3Q5TF21 947 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 CKAP2LQ8IYA6 745 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 C7orf61Q8IZ16 206 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 SYTL5Q8TDW5 730 aaPredicted RBP4.95□□□□□ -1.62
ERCC8-206ENST00000484330 ASIC4Q96FT7 647 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 GBP3Q9H0R5 595 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 SEMA3GQ9NS98 782 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 U3KQE9 123 aa4.95□□□□□ -1.62
ERCC8-206ENST00000484330 SSU72P8A0A1W2PR75 194 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 U2SURPO15042 1029 aaKnown RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 LRRN2O75325 713 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 SRFP11831 508 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 ENDOUP21128 410 aaKnown RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 TPP2P29144 1249 aaPredicted RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 ETFBP38117 255 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 BNIP3Q12983 259 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 ZYXQ15942 572 aaKnown RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 NOL9Q5SY16 702 aaKnown RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 VHLLQ6RSH7 139 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 TSPYL5Q86VY4 417 aaPredicted RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 ABI1Q8IZP0 508 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 ZNF655Q8N720 491 aaPredicted RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 DAGLBQ8NCG7 672 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 SREK1Q8WXA9 508 aaKnown RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 ZNF512BQ96KM6 892 aaPredicted RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 DUSP15Q9H1R2 295 aaPredicted RBP4.94□□□□□ -1.62
ERCC8-206ENST00000484330 ZNF408Q9H9D4 720 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 DUSP13Q9UII6 198 aa4.94□□□□□ -1.62
ERCC8-206ENST00000484330 A0A087WZG4 1122 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 SIGLEC6O43699 453 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 CD8BP10966 210 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 ITGA4P13612 1032 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 FUT4P22083 530 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 LTKP29376 864 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 ZNF143P52747 638 aaPredicted RBP4.93□□□□□ -1.62
ERCC8-206ENST00000484330 ZP2Q05996 745 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 PLCL1Q15111 1095 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 NBPF6Q5VWK0 638 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 HEATR6Q6AI08 1181 aaKnown RBP4.93□□□□□ -1.62
ERCC8-206ENST00000484330 SLC23A3Q6PIS1 610 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 ANKS3Q6ZW76 656 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 CBLL1Q75N03 491 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 CREG2Q8IUH2 290 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 FAM169BQ8N8A8 192 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 PI4K2BQ8TCG2 481 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 NBPF4Q96M43 638 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 DSCC1Q9BVC3 393 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 TRIM55Q9BYV6 548 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 PRDM14Q9GZV8 571 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 ATP13A1Q9HD20 1204 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 PAK6Q9NQU5 681 aaPredicted RBP4.93□□□□□ -1.62
ERCC8-206ENST00000484330 CHST7Q9NS84 486 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 LTBP3Q9NS15 1303 aa4.93□□□□□ -1.62
ERCC8-206ENST00000484330 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 PPM1BO75688 479 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 TP53P04637 393 aaPredicted RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 CD247P20963 164 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 GTF2F1P35269 517 aaKnown RBP eCLIP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 PCBP3P57721 371 aaKnown RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 TDRD10Q5VZ19 366 aaKnown RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 LARP1BQ659C4 914 aaKnown RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 CWF19L1Q69YN2 538 aaKnown RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 KIAA1211LQ6NV74 962 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 RNF111Q6ZNA4 994 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 SPRED2Q7Z698 418 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 CRACR2BQ8N4Y2 399 aaPredicted RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 DHX38Q92620 1227 aaKnown RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 APBA2Q99767 749 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 HAUS7Q99871 368 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 WHRNQ9P202 907 aa4.92□□□□□ -1.62
ERCC8-206ENST00000484330 SF3B6Q9Y3B4 125 aaKnown RBP4.92□□□□□ -1.62
ERCC8-206ENST00000484330 ANKRD34BA5PLL1 514 aa4.91□□□□□ -1.62
ERCC8-206ENST00000484330 C9IYK1 514 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms