RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 TXLNAP40222 546 aa22.28■■□□□ 1.16
LIMS2-215ENST00000484252 TUBB2AQ13885 445 aa22.28■■□□□ 1.16
LIMS2-215ENST00000484252 FAM47AQ5JRC9 791 aa22.28■■□□□ 1.16
LIMS2-215ENST00000484252 ANKRD20A12PQ8NF67 263 aa22.28■■□□□ 1.16
LIMS2-215ENST00000484252 TUBB2BQ9BVA1 445 aa22.28■■□□□ 1.16
LIMS2-215ENST00000484252 CCDC66A2RUB6 948 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 TSPY2A6NKD2 308 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 TRIM14Q14142 442 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 RRAGBQ5VZM2 374 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 RSRC2Q7L4I2 434 aaKnown RBP22.27■■□□□ 1.16
LIMS2-215ENST00000484252 SMYD4Q8IYR2 804 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-215ENST00000484252 RABGGTAQ92696 567 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 MRPL44Q9H9J2 332 aaKnown RBP22.27■■□□□ 1.16
LIMS2-215ENST00000484252 KIAA1551Q9HCM1 1747 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 NMT2O60551 498 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 MTF1Q14872 753 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 KARSQ15046 597 aaKnown RBP22.27■■□□□ 1.16
LIMS2-215ENST00000484252 ZNF658Q5TYW1 1059 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-215ENST00000484252 RAD9BQ6WBX8 426 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 RASGRP2Q7LDG7 609 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 LINC00116Q8NCU8 138 aa22.27■■□□□ 1.16
LIMS2-215ENST00000484252 CCDC12Q8WUD4 166 aaPredicted RBP22.27■■□□□ 1.16
LIMS2-215ENST00000484252 KIF5CO60282 957 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 MCM7P33993 719 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 PAK1Q13153 545 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 SPTY2D1Q68D10 685 aaPredicted RBP22.26■■□□□ 1.15
LIMS2-215ENST00000484252 DGKHQ86XP1 1220 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 GOLGA1Q92805 767 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 MYH13Q9UKX3 1938 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 CNTNAP4Q9C0A0 1308 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 CCDC178Q5BJE1 867 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 BLIDQ8IZY5 108 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 ANKS1AQ92625 1134 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 NLRP3Q96P20 1036 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 KAT14Q9H8E8 782 aa22.26■■□□□ 1.15
LIMS2-215ENST00000484252 TAF1P21675 1872 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 KLRK1P26718 216 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 GNAQP50148 359 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 SEMA3FQ13275 785 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 KRT31Q15323 416 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 IL17AQ16552 155 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 JAKMIP3Q5VZ66 844 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 RCSD1Q6JBY9 416 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 TMTC1Q8IUR5 882 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 CPLX3Q8WVH0 158 aa22.25■■□□□ 1.15
LIMS2-215ENST00000484252 TTF2Q9UNY4 1162 aaKnown RBP22.25■■□□□ 1.15
LIMS2-215ENST00000484252 GYPCP04921 128 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 CYP2D6P10635 497 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 CASP14P31944 242 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 TBC1D9BQ66K14 1250 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 BLZF1Q9H2G9 400 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 PCDHA4Q9UN74 947 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 N4BP3O15049 544 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 RPN1P04843 607 aaKnown RBP22.24■■□□□ 1.15
LIMS2-215ENST00000484252 TUBB4BP68371 445 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 C4orf32Q8N8J7 132 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 STAMQ92783 540 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 MTRQ99707 1265 aa22.24■■□□□ 1.15
LIMS2-215ENST00000484252 PRDX5P30044 214 aa22.23■■□□□ 1.15
LIMS2-215ENST00000484252 COPB1P53618 953 aaKnown RBP22.23■■□□□ 1.15
LIMS2-215ENST00000484252 EVX2Q03828 476 aa22.23■■□□□ 1.15
LIMS2-215ENST00000484252 GALNT17Q6IS24 598 aa22.23■■□□□ 1.15
LIMS2-215ENST00000484252 BICDL1Q6ZP65 573 aa22.23■■□□□ 1.15
LIMS2-215ENST00000484252 NELFBQ8WX92 580 aa22.23■■□□□ 1.15
LIMS2-215ENST00000484252 TFCP2L1Q9NZI6 479 aa22.23■■□□□ 1.15
LIMS2-215ENST00000484252 PLA2G4AP47712 749 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 TCP11X2Q5H9J9 407 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 TEX35Q5T0J7 233 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 LZTFL1Q9NQ48 299 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 MCM9Q9NXL9 1143 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 KCNQ2O43526 872 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 MYL1P05976 194 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 STAT6P42226 847 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 FXR1P51114 621 aaKnown RBP eCLIP22.22■■□□□ 1.15
LIMS2-215ENST00000484252 DZIP1Q86YF9 867 aaKnown RBP22.22■■□□□ 1.15
LIMS2-215ENST00000484252 CEP112Q8N8E3 955 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 CCDC88AQ3V6T2 1871 aa22.22■■□□□ 1.15
LIMS2-215ENST00000484252 KCNJ18B7U540 433 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 H7C1D1 291 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 CCT6AP40227 531 aaKnown RBP22.21■■□□□ 1.15
LIMS2-215ENST00000484252 KCNJ12Q14500 433 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 GRM4Q14833 912 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 C12orf60Q5U649 245 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 CC2D1AQ6P1N0 951 aaPredicted RBP22.21■■□□□ 1.15
LIMS2-215ENST00000484252 DAGLBQ8NCG7 672 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 SETDB2Q96T68 719 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 TMEM51Q9NW97 253 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 NARFQ9UHQ1 456 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 TFAP4Q01664 338 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 WWC2Q6AWC2 1192 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 CYP26C1Q6V0L0 522 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 SRGAP1Q7Z6B7 1085 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 PNMA1Q8ND90 353 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 CCDC148Q8NFR7 591 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 ABHD10Q9NUJ1 306 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 MYO1AQ9UBC5 1043 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 CDC23Q9UJX2 597 aa22.21■■□□□ 1.15
LIMS2-215ENST00000484252 ROBO3Q96MS0 1386 aa22.2■■□□□ 1.15
LIMS2-215ENST00000484252 DTHD1Q6ZMT9 781 aa22.2■■□□□ 1.14
LIMS2-215ENST00000484252 DISC1Q9NRI5 854 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 1295.9 ms