RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 MTMR7Q9Y216 660 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 MYH8P13535 1937 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 COL2A1P02458 1487 aaPredicted RBP18.92■□□□□ 0.62
PCCB-217ENST00000484181 IGKV6D-41A0A0C4DH26 115 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 SMTNL1A8MU46 457 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 ATP2C1P98194 919 aaPredicted RBP18.92■□□□□ 0.62
PCCB-217ENST00000484181 IQCB1Q15051 598 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 SARM1Q6SZW1 724 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 C11orf57Q6ZUT1 292 aaPredicted RBP18.92■□□□□ 0.62
PCCB-217ENST00000484181 TRIM5Q9C035 493 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 C6orf50Q9HD87 102 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 TMOD2Q9NZR1 351 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 PI4KBQ9UBF8 816 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 TUBE1Q9UJT0 475 aa18.92■□□□□ 0.62
PCCB-217ENST00000484181 AKR1B1P15121 316 aa18.91■□□□□ 0.62
PCCB-217ENST00000484181 ARL6IP4Q66PJ3 421 aaKnown RBP18.91■□□□□ 0.62
PCCB-217ENST00000484181 WWC2Q6AWC2 1192 aa18.91■□□□□ 0.62
PCCB-217ENST00000484181 GPKOWQ92917 476 aaPredicted RBP eCLIP18.91■□□□□ 0.621e-9■■■■□ 25.5
PCCB-217ENST00000484181 DACH1Q9UI36 760 aa18.91■□□□□ 0.62
PCCB-217ENST00000484181 STXBP3O00186 592 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 C21orf2O43822 256 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 ENTPD3O75355 529 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 PDHBP11177 359 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 SHMT1P34896 483 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 NAPAP54920 295 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 GPATCH4Q5T3I0 446 aaKnown RBP18.9■□□□□ 0.62
PCCB-217ENST00000484181 KRT25Q7Z3Z0 450 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 CSRNP2Q9H175 543 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 HDAC9Q9UKV0 1011 aa18.9■□□□□ 0.62
PCCB-217ENST00000484181 LAD1O00515 517 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 MPHOSPH10O00566 681 aaKnown RBP18.89■□□□□ 0.61
PCCB-217ENST00000484181 GOLGA8HP0CJ92 632 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 CDC25BP30305 580 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 TXLNAP40222 546 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 FOXP4Q8IVH2 680 aaPredicted RBP18.89■□□□□ 0.61
PCCB-217ENST00000484181 ZSCAN29Q8IWY8 852 aaPredicted RBP18.89■□□□□ 0.61
PCCB-217ENST00000484181 ADAMTSL1Q8N6G6 1762 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 ESYT2A0FGR8 921 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 FAM205CA6NFA0 338 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 CYTH3O43739 400 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 SNHG28P0DPA3 235 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 ZNF174Q15697 407 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 PPP1R18Q6NYC8 613 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 USP17L2Q6R6M4 530 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 TRIML1Q8N9V2 468 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 ZMYND12Q9H0C1 365 aa18.89■□□□□ 0.61
PCCB-217ENST00000484181 ZNF646O15015 1829 aaPredicted RBP18.88■□□□□ 0.61
PCCB-217ENST00000484181 POLR2DO15514 142 aaKnown RBP18.88■□□□□ 0.61
PCCB-217ENST00000484181 SMC2O95347 1197 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 ZNF75DP51815 510 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 NFIAQ12857 509 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 PTGDRQ13258 359 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 ORC2Q13416 577 aaPredicted RBP18.88■□□□□ 0.61
PCCB-217ENST00000484181 POSTNQ15063 836 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 LONRF3Q496Y0 759 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 EARS2Q5JPH6 523 aaKnown RBP18.88■□□□□ 0.61
PCCB-217ENST00000484181 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 AOPEPQ8N6M6 819 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 RIOX1Q9H6W3 641 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 KCNQ5Q9NR82 932 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 CLIP2Q9UDT6 1046 aa18.88■□□□□ 0.61
PCCB-217ENST00000484181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.87■□□□□ 0.61
PCCB-217ENST00000484181 USP17L5A8MUK1 530 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 IKBKBO14920 756 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 MYO1BO43795 1136 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 ZNF500O60304 480 aaPredicted RBP18.87■□□□□ 0.61
PCCB-217ENST00000484181 DPCR1Q3MIW9 517 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 PLA2G4DQ86XP0 818 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 CCDC125Q86Z20 511 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 DHX40Q8IX18 779 aaKnown RBP18.87■□□□□ 0.61
PCCB-217ENST00000484181 LRRC47Q8N1G4 583 aaKnown RBP18.87■□□□□ 0.61
PCCB-217ENST00000484181 LARGE2Q8N3Y3 721 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 MRFAP1L1Q96HT8 127 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 ATRNL1Q5VV63 1379 aa18.87■□□□□ 0.61
PCCB-217ENST00000484181 MCM7P33993 719 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 LONP1P36776 959 aaKnown RBP18.86■□□□□ 0.61
PCCB-217ENST00000484181 CFAP100Q494V2 611 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 CERKLQ49MI3 558 aaPredicted RBP18.86■□□□□ 0.61
PCCB-217ENST00000484181 METTL16Q86W50 562 aaKnown RBP18.86■□□□□ 0.61
PCCB-217ENST00000484181 HOMER1Q86YM7 354 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 OGFOD1Q8N543 542 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 SMARCE1Q969G3 411 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 KANSL2Q9H9L4 492 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 PSME4Q14997 1843 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 SCN9AQ15858 1988 aa18.86■□□□□ 0.61
PCCB-217ENST00000484181 M0R2N6 131 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 ZNF543Q08ER8 600 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 PNOCQ13519 176 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 NONOQ15233 471 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCCB-217ENST00000484181 SPECC1Q5M775 1068 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 RSBN1LQ6PCB5 846 aaPredicted RBP18.85■□□□□ 0.61
PCCB-217ENST00000484181 TMEM179Q6ZVK1 233 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 ERCC4Q92889 916 aaPredicted RBP18.85■□□□□ 0.61
PCCB-217ENST00000484181 FAM198AQ9UFP1 575 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 GREB1LQ9C091 1923 aaPredicted RBP18.85■□□□□ 0.61
PCCB-217ENST00000484181 VWA3AA6NCI4 1184 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 SMCO2A6NFE2 343 aa18.85■□□□□ 0.61
PCCB-217ENST00000484181 BIN1O00499 593 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms