RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
RIF1-210ENST00000484077 TBC1D32Q96NH3 1257 aa8.53□□□□□ -1.04
RIF1-210ENST00000484077 FANCD2OSQ96PS1 177 aa8.53□□□□□ -1.04
RIF1-210ENST00000484077 TESK2Q96S53 571 aa8.53□□□□□ -1.04
RIF1-210ENST00000484077 ZC3H12CQ9C0D7 883 aaKnown RBP8.53□□□□□ -1.04
RIF1-210ENST00000484077 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
RIF1-210ENST00000484077 NFAT5O94916 1531 aa8.53□□□□□ -1.04
RIF1-210ENST00000484077 BCL9LQ86UU0 1499 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 A0A1W2PP64 1363 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 KTN1Q86UP2 1357 aaKnown RBP8.52□□□□□ -1.05
RIF1-210ENST00000484077 SPINK2P20155 84 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 BMP6P22004 513 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 ERVK-24P63145 666 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 DTX1Q86Y01 620 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 NPAS4Q8IUM7 802 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 STK35Q8TDR2 534 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 GATA6Q92908 595 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 ABCC6O95255 1503 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 EDC4Q6P2E9 1401 aaKnown RBP8.52□□□□□ -1.05
RIF1-210ENST00000484077 USP19O94966 1318 aa8.52□□□□□ -1.05
RIF1-210ENST00000484077 RGPD5Q99666 1765 aa8.51□□□□□ -1.05
RIF1-210ENST00000484077 FOSL1P15407 271 aa8.51□□□□□ -1.05
RIF1-210ENST00000484077 ZC3H12AQ5D1E8 599 aaKnown RBP8.51□□□□□ -1.05
RIF1-210ENST00000484077 MAP1SQ66K74 1059 aaPredicted RBP8.51□□□□□ -1.05
RIF1-210ENST00000484077 FBXL6Q8N531 539 aa8.51□□□□□ -1.05
RIF1-210ENST00000484077 CBX8Q9HC52 389 aa8.51□□□□□ -1.05
RIF1-210ENST00000484077 DISC1Q9NRI5 854 aa8.51□□□□□ -1.05
RIF1-210ENST00000484077 BRWD3Q6RI45 1802 aa8.51□□□□□ -1.05
RIF1-210ENST00000484077 COL18A1P39060 1754 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 FAM208AQ9UK61 1670 aaKnown RBP8.5□□□□□ -1.05
RIF1-210ENST00000484077 THSD7AQ9UPZ6 1657 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 OVOS2A0A0J9YW53 1432 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 TMF1P82094 1093 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 DUSP27Q5VZP5 1158 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 OVOS2Q6IE36 1432 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 LLGL2Q6P1M3 1020 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 DAGLAQ9Y4D2 1042 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 TTC21AQ8NDW8 1320 aa8.5□□□□□ -1.05
RIF1-210ENST00000484077 ANKRD36BQ8N2N9 1353 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 KIAA0232Q92628 1395 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 ADMP35318 185 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 RBM6P78332 1123 aaKnown RBP8.49□□□□□ -1.05
RIF1-210ENST00000484077 CCDC27Q2M243 656 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
RIF1-210ENST00000484077 RNF214Q8ND24 703 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 GPBAR1Q8TDU6 330 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 ACSBG1Q96GR2 724 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 DUSP9Q99956 384 aaKnown RBP8.49□□□□□ -1.05
RIF1-210ENST00000484077 C1GALT1Q9NS00 363 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 PCOLCE2Q9UKZ9 415 aa8.49□□□□□ -1.05
RIF1-210ENST00000484077 TRPC5Q9UL62 973 aaPredicted RBP8.49□□□□□ -1.05
RIF1-210ENST00000484077 TTF2Q9UNY4 1162 aaKnown RBP8.49□□□□□ -1.05
RIF1-210ENST00000484077 CPDO75976 1380 aa8.48□□□□□ -1.05
RIF1-210ENST00000484077 FAM83GA6ND36 823 aa8.48□□□□□ -1.05
RIF1-210ENST00000484077 MED26O95402 600 aa8.48□□□□□ -1.05
RIF1-210ENST00000484077 CYP27C1Q4G0S4 372 aa8.48□□□□□ -1.05
RIF1-210ENST00000484077 OGFOD3Q6PK18 319 aa8.48□□□□□ -1.05
RIF1-210ENST00000484077 HDGFL2Q7Z4V5 671 aaPredicted RBP8.48□□□□□ -1.05
RIF1-210ENST00000484077 PUS7Q96PZ0 661 aaKnown RBP8.48□□□□□ -1.05
RIF1-210ENST00000484077 COL5A2P05997 1499 aaPredicted RBP8.48□□□□□ -1.05
RIF1-210ENST00000484077 PARP4Q9UKK3 1724 aaKnown RBP8.48□□□□□ -1.05
RIF1-210ENST00000484077 TTC21BQ7Z4L5 1316 aa8.48□□□□□ -1.05
RIF1-210ENST00000484077 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 CAMTA1Q9Y6Y1 1673 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 PAGE1O75459 146 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 ZC3H6P61129 1189 aaKnown RBP8.47□□□□□ -1.05
RIF1-210ENST00000484077 RPS26P62854 115 aaKnown RBP8.47□□□□□ -1.05
RIF1-210ENST00000484077 DAB2P98082 770 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 TTLL4Q14679 1199 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 PCNX4Q63HM2 1172 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 UNC5CLQ8IV45 518 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
RIF1-210ENST00000484077 CYP26A1O43174 497 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 FBXO24O75426 580 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 PRNPP04156 253 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 RLBP1P12271 317 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 CHRNA2Q15822 529 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 MSMPQ1L6U9 139 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 FBXO33Q7Z6M2 555 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 BTG4Q9NY30 223 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 TERF2IPQ9NYB0 399 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 USP31Q70CQ4 1352 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 NSD3Q9BZ95 1437 aa8.46□□□□□ -1.06
RIF1-210ENST00000484077 FAM170BA6NMN3 283 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 FANCGO15287 622 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 WNT11O96014 354 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 CELA3AP09093 270 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 HSPA5P11021 654 aaKnown RBP8.45□□□□□ -1.06
RIF1-210ENST00000484077 ST13P50502 369 aaKnown RBP8.45□□□□□ -1.06
RIF1-210ENST00000484077 TMC4Q7Z404 712 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 KCT2Q8NC54 265 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 GRIN3AQ8TCU5 1115 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 GZF1Q9H116 711 aaPredicted RBP8.45□□□□□ -1.06
RIF1-210ENST00000484077 SLC12A5Q9H2X9 1139 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 PARP2Q9UGN5 583 aa8.45□□□□□ -1.06
RIF1-210ENST00000484077 CCDC9Q9Y3X0 531 aaKnown RBP8.45□□□□□ -1.06
RIF1-210ENST00000484077 RGPD1P0DJD0 1748 aa8.44□□□□□ -1.06
RIF1-210ENST00000484077 PEAK1Q9H792 1746 aa8.44□□□□□ -1.06
RIF1-210ENST00000484077 TNS1Q9HBL0 1735 aaKnown RBP8.44□□□□□ -1.06
RIF1-210ENST00000484077 RNGTTO60942 597 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms