RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 XYLBO75191 536 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 RARAP10276 462 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 GRNP28799 593 aaKnown RBP7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 RIPK4P57078 832 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 AAMPQ13685 434 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 ELOA3BQ3SY89 546 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 PHLDB3Q6NSJ2 640 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 CHSY3Q70JA7 882 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 CTU1Q7Z7A3 348 aaKnown RBP7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 ELOA3Q8NG57 546 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 GPR152Q8TDT2 470 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 PIK3R5Q8WYR1 880 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 CDCA5Q96FF9 252 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 SCARF2Q96GP6 870 aaPredicted RBP7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 ANO2Q9NQ90 1003 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 POLLQ9UGP5 575 aa7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 POLR2AP24928 1970 aaKnown RBP7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 SASH3O75995 380 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 MPSTP25325 297 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 ADH7P40394 386 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 ZNF211Q13398 564 aaPredicted RBP7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 KRT24Q2M2I5 525 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 ANGEL2Q5VTE6 544 aaKnown RBP7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 RASAL3Q86YV0 1011 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 CSRNP1Q96S65 589 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 ZC3H12CQ9C0D7 883 aaKnown RBP7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 CHPF2Q9P2E5 772 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 LAS1LQ9Y4W2 734 aaKnown RBP7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 SCN9AQ15858 1988 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 PAPPA2Q9BXP8 1791 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 ZBTB39O15060 712 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 UFL1O94874 794 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 TARSP26639 723 aaKnown RBP7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 LMOD3Q0VAK6 560 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 ATCAYQ86WG3 371 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 TBC1D16Q8TBP0 767 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 EFCC1Q9HA90 598 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 BABAM1Q9NWV8 329 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 HDAC9Q9UKV0 1011 aa7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 SCAF8Q9UPN6 1271 aaKnown RBP7.78□□□□□ -1.16
SEMA3D-204ENST00000484038 CNTNAP5Q8WYK1 1306 aa7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 IRS4O14654 1257 aaPredicted RBP7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 VIL1P09327 827 aaKnown RBP7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 TMPOP42166 694 aaKnown RBP7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 SF3B3Q15393 1217 aaKnown RBP7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 NOM1Q5C9Z4 860 aaKnown RBP7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 PLBD2Q8NHP8 589 aa7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 TNFRSF25Q93038 417 aa7.77□□□□□ -1.17
SEMA3D-204ENST00000484038 PDE4DIPQ5VU43 2346 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 PHF20L1A8MW92 1017 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 TBC1D8O95759 1140 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 ARID4AP29374 1257 aaPredicted RBP7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 RPS8P62241 208 aaKnown RBP7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 SNRPNP63162 240 aaKnown RBP7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 DNM1Q05193 864 aaKnown RBP7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 MOB2Q70IA6 237 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 BEND7Q8N7W2 519 aaPredicted RBP7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 TTC16Q8NEE8 873 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 ISCA1Q9BUE6 129 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 MYOZ2Q9NPC6 264 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 MKL2Q9ULH7 1088 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 KCNMB2Q9Y691 235 aa7.76□□□□□ -1.17
SEMA3D-204ENST00000484038 IRS1P35568 1242 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 SERPINB4P48594 390 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 ZNF280AP59817 542 aaPredicted RBP7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 FKBP1BP68106 108 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 PKN2Q16513 984 aaKnown RBP7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 PRAMEF18Q5VWM3 479 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 DHX32Q7L7V1 743 aaKnown RBP7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 CCDC146Q8IYE0 955 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 AGBL3Q8NEM8 1001 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 ZNF296Q8WUU4 475 aaPredicted RBP7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 SEC31BQ9NQW1 1179 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 DNAJB12Q9NXW2 375 aaKnown RBP7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 DBF4Q9UBU7 674 aaPredicted RBP7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 FNDC3AQ9Y2H6 1198 aaKnown RBP7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 PSME4Q14997 1843 aa7.75□□□□□ -1.17
SEMA3D-204ENST00000484038 ZNF609O15014 1411 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 ADARB2-AS1A8MUL3 147 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 UBE2Q2LH0YL09 131 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 H3BRB1 525 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 PCSK2P16519 638 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 EIF1AXP47813 144 aaKnown RBP7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 TRIP4Q15650 581 aaPredicted RBP7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 GLYCTKQ8IVS8 523 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 EDEM1Q92611 657 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 TUT1Q9H6E5 874 aaKnown RBP7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 PODXL2Q9NZ53 605 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 ZFATQ9P243 1243 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 PITPNM2Q9BZ72 1349 aa7.74□□□□□ -1.17
SEMA3D-204ENST00000484038 CHL1O00533 1208 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 FAM13AO94988 1023 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 NF2P35240 595 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 CCDC152Q4G0S7 254 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 ALKBH2Q6NS38 261 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 ZBTB38Q8NAP3 1195 aaPredicted RBP7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 C11orf16Q9NQ32 467 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 HYPKQ9NX55 129 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms