RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LRCH3Q96II8 777 aa21.61■■□□□ 1.05
ATG4B-221ENST00000483778 NUP88Q99567 741 aaPredicted RBP21.61■■□□□ 1.05
ATG4B-221ENST00000483778 DDX20Q9UHI6 824 aaKnown RBP21.61■■□□□ 1.05
ATG4B-221ENST00000483778 GPAA1O43292 621 aa21.6■■□□□ 1.05
ATG4B-221ENST00000483778 STRNO43815 780 aa21.6■■□□□ 1.05
ATG4B-221ENST00000483778 CYBAP13498 195 aa21.6■■□□□ 1.05
ATG4B-221ENST00000483778 FAM83BQ5T0W9 1011 aa21.6■■□□□ 1.05
ATG4B-221ENST00000483778 MB21D1Q8N884 522 aa21.6■■□□□ 1.05
ATG4B-221ENST00000483778 PI4K2BQ8TCG2 481 aa21.6■■□□□ 1.05
ATG4B-221ENST00000483778 RAD21O60216 631 aa21.59■■□□□ 1.05
ATG4B-221ENST00000483778 MAGEA10P43363 369 aaPredicted RBP21.59■■□□□ 1.05
ATG4B-221ENST00000483778 SENP6Q9GZR1 1112 aaPredicted RBP21.59■■□□□ 1.05
ATG4B-221ENST00000483778 SH2D4AQ9H788 454 aa21.59■■□□□ 1.05
ATG4B-221ENST00000483778 ARPP21Q9UBL0 812 aaPredicted RBP21.59■■□□□ 1.05
ATG4B-221ENST00000483778 LAMA3Q16787 3333 aa21.59■■□□□ 1.05
ATG4B-221ENST00000483778 PRDM1O75626 825 aa21.58■■□□□ 1.05
ATG4B-221ENST00000483778 OLFML2BQ68BL8 750 aa21.58■■□□□ 1.05
ATG4B-221ENST00000483778 GIMAP6Q6P9H5 292 aa21.58■■□□□ 1.05
ATG4B-221ENST00000483778 REPS2Q8NFH8 660 aa21.58■■□□□ 1.05
ATG4B-221ENST00000483778 MROH8Q9H579 483 aa21.58■■□□□ 1.05
ATG4B-221ENST00000483778 VWA5AO00534 786 aa21.57■■□□□ 1.04
ATG4B-221ENST00000483778 PGK2P07205 417 aa21.57■■□□□ 1.04
ATG4B-221ENST00000483778 BMP8BP34820 402 aa21.57■■□□□ 1.04
ATG4B-221ENST00000483778 GJC2Q5T442 439 aaPredicted RBP21.57■■□□□ 1.04
ATG4B-221ENST00000483778 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
ATG4B-221ENST00000483778 MKNK2Q9HBH9 465 aa21.57■■□□□ 1.04
ATG4B-221ENST00000483778 PPP1R9AQ9ULJ8 1098 aa21.57■■□□□ 1.04
ATG4B-221ENST00000483778 IGKV6D-41A0A0C4DH26 115 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 APPP05067 770 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 ATN1P54259 1190 aaPredicted RBP21.56■■□□□ 1.04
ATG4B-221ENST00000483778 IFNL3Q8IZI9 196 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 MAML3Q96JK9 1138 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 GOPCQ9HD26 462 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 CLIP2Q9UDT6 1046 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 ROBO3Q96MS0 1386 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 MCM3APO60318 1980 aa21.56■■□□□ 1.04
ATG4B-221ENST00000483778 A0A1W2PPC1 479 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 PATL2C9JE40 543 aaKnown RBP21.55■■□□□ 1.04
ATG4B-221ENST00000483778 F5H6K3 240 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 ZFYP08048 801 aaPredicted RBP21.55■■□□□ 1.04
ATG4B-221ENST00000483778 FCER1AP12319 257 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 KLRC3Q07444 240 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 RIOX2Q8IUF8 465 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 ABRAQ8N0Z2 381 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 CRBNQ96SW2 442 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 NYAP2Q9P242 653 aa21.55■■□□□ 1.04
ATG4B-221ENST00000483778 ZNF214Q9UL59 606 aaPredicted RBP21.55■■□□□ 1.04
ATG4B-221ENST00000483778 NDUFB10O96000 172 aa21.54■■□□□ 1.04
ATG4B-221ENST00000483778 TAL1P17542 331 aaPredicted RBP21.54■■□□□ 1.04
ATG4B-221ENST00000483778 STAT3P40763 770 aa21.54■■□□□ 1.04
ATG4B-221ENST00000483778 TDO2P48775 406 aa21.54■■□□□ 1.04
ATG4B-221ENST00000483778 INCENPQ9NQS7 918 aa21.54■■□□□ 1.04
ATG4B-221ENST00000483778 RIPK3Q9Y572 518 aa21.54■■□□□ 1.04
ATG4B-221ENST00000483778 TTC41PQ6P2S7 1318 aa21.54■■□□□ 1.04
ATG4B-221ENST00000483778 SALL3Q9BXA9 1300 aa21.54■■□□□ 1.04
ATG4B-221ENST00000483778 FOXP2O15409 715 aa21.53■■□□□ 1.04
ATG4B-221ENST00000483778 SLC25A27O95847 323 aa21.53■■□□□ 1.04
ATG4B-221ENST00000483778 RRP1P56182 461 aaKnown RBP21.53■■□□□ 1.04
ATG4B-221ENST00000483778 ZMYM1Q5SVZ6 1142 aa21.53■■□□□ 1.04
ATG4B-221ENST00000483778 CCDC129Q6ZRS4 1044 aa21.53■■□□□ 1.04
ATG4B-221ENST00000483778 CEP95Q96GE4 821 aa21.53■■□□□ 1.04
ATG4B-221ENST00000483778 MMP19Q99542 508 aa21.53■■□□□ 1.04
ATG4B-221ENST00000483778 MSCO60682 206 aa21.52■■□□□ 1.04
ATG4B-221ENST00000483778 MDM2Q00987 491 aaPredicted RBP21.52■■□□□ 1.04
ATG4B-221ENST00000483778 ZNF792Q3KQV3 632 aa21.52■■□□□ 1.04
ATG4B-221ENST00000483778 FAM47AQ5JRC9 791 aa21.52■■□□□ 1.04
ATG4B-221ENST00000483778 CHMP4CQ96CF2 233 aa21.52■■□□□ 1.04
ATG4B-221ENST00000483778 TACC3Q9Y6A5 838 aa21.52■■□□□ 1.04
ATG4B-221ENST00000483778 DNM1LO00429 736 aa21.51■■□□□ 1.03
ATG4B-221ENST00000483778 SEPT4O43236 478 aa21.51■■□□□ 1.03
ATG4B-221ENST00000483778 GNAT2P19087 354 aa21.51■■□□□ 1.03
ATG4B-221ENST00000483778 ZNF444Q8N0Y2 327 aaPredicted RBP21.51■■□□□ 1.03
ATG4B-221ENST00000483778 MKL1Q969V6 931 aa21.51■■□□□ 1.03
ATG4B-221ENST00000483778 SLF1Q9BQI6 1058 aa21.51■■□□□ 1.03
ATG4B-221ENST00000483778 FSD1Q9BTV5 496 aa21.51■■□□□ 1.03
ATG4B-221ENST00000483778 MTMR4Q9NYA4 1195 aa21.51■■□□□ 1.03
ATG4B-221ENST00000483778 ERC2O15083 957 aa21.5■■□□□ 1.03
ATG4B-221ENST00000483778 MYCNP04198 464 aaPredicted RBP21.5■■□□□ 1.03
ATG4B-221ENST00000483778 MX1P20591 662 aa21.5■■□□□ 1.03
ATG4B-221ENST00000483778 ANKRD45Q5TZF3 282 aa21.5■■□□□ 1.03
ATG4B-221ENST00000483778 LRRC47Q8N1G4 583 aaKnown RBP21.5■■□□□ 1.03
ATG4B-221ENST00000483778 UBE2OQ9C0C9 1292 aaKnown RBP21.5■■□□□ 1.03
ATG4B-221ENST00000483778 SLC5A4Q9NY91 659 aa21.5■■□□□ 1.03
ATG4B-221ENST00000483778 SLC4A3P48751 1232 aa21.49■■□□□ 1.03
ATG4B-221ENST00000483778 RTP1P59025 263 aa21.49■■□□□ 1.03
ATG4B-221ENST00000483778 LRRC41Q15345 812 aa21.49■■□□□ 1.03
ATG4B-221ENST00000483778 SLC39A5Q6ZMH5 540 aa21.49■■□□□ 1.03
ATG4B-221ENST00000483778 ARRDC4Q8NCT1 418 aa21.49■■□□□ 1.03
ATG4B-221ENST00000483778 FERMT2Q96AC1 680 aa21.49■■□□□ 1.03
ATG4B-221ENST00000483778 LTBP2Q14767 1821 aa21.49■■□□□ 1.03
ATG4B-221ENST00000483778 ADCYAP1R1P41586 468 aa21.48■■□□□ 1.03
ATG4B-221ENST00000483778 CTDSPL2Q05D32 466 aa21.48■■□□□ 1.03
ATG4B-221ENST00000483778 CPXCR1Q8N123 301 aa21.48■■□□□ 1.03
ATG4B-221ENST00000483778 PRPF38AQ8NAV1 312 aaKnown RBP21.48■■□□□ 1.03
ATG4B-221ENST00000483778 NEDD1Q8NHV4 660 aa21.48■■□□□ 1.03
ATG4B-221ENST00000483778 LENG1Q96BZ8 264 aaPredicted RBP21.48■■□□□ 1.03
ATG4B-221ENST00000483778 TINF2Q9BSI4 451 aa21.48■■□□□ 1.03
ATG4B-221ENST00000483778 RAVER2Q9HCJ3 691 aaKnown RBP21.48■■□□□ 1.03
ATG4B-221ENST00000483778 COL6A3P12111 3177 aa21.48■■□□□ 1.03
ATG4B-221ENST00000483778 LAMA2P24043 3122 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms