RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 BRF1Q92994 677 aa8.73□□□□□ -1.01
PMS1-219ENST00000483293 PPP1R14AQ96A00 147 aa8.73□□□□□ -1.01
PMS1-219ENST00000483293 ARMC5Q96C12 935 aa8.73□□□□□ -1.01
PMS1-219ENST00000483293 LNPKQ9C0E8 428 aa8.73□□□□□ -1.01
PMS1-219ENST00000483293 ZNF451Q9Y4E5 1061 aa8.73□□□□□ -1.01
PMS1-219ENST00000483293 SHISA3A0PJX4 238 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 ZNF865P0CJ78 1059 aaPredicted RBP8.72□□□□□ -1.01
PMS1-219ENST00000483293 GRIK1P39086 918 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 CD96P40200 585 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 KIR3DL1P43629 444 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 DDR2Q16832 855 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 CLEC16AQ2KHT3 1053 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 HEATR6Q6AI08 1181 aaKnown RBP8.72□□□□□ -1.01
PMS1-219ENST00000483293 SPACA3Q8IXA5 215 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 C7orf61Q8IZ16 206 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 ADCY4Q8NFM4 1077 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 UBE2FQ969M7 185 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 GFOD1Q9NXC2 390 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 PCDHB12Q9Y5F1 795 aa8.72□□□□□ -1.01
PMS1-219ENST00000483293 EPHX1P07099 455 aa8.71□□□□□ -1.02
PMS1-219ENST00000483293 AOC3Q16853 763 aa8.71□□□□□ -1.02
PMS1-219ENST00000483293 NOL9Q5SY16 702 aaKnown RBP8.71□□□□□ -1.02
PMS1-219ENST00000483293 MRM1Q6IN84 353 aaKnown RBP8.71□□□□□ -1.02
PMS1-219ENST00000483293 DPH6Q7L8W6 267 aa8.71□□□□□ -1.02
PMS1-219ENST00000483293 COX4I2Q96KJ9 171 aa8.71□□□□□ -1.02
PMS1-219ENST00000483293 HAUS7Q99871 368 aa8.71□□□□□ -1.02
PMS1-219ENST00000483293 ASCC2Q9H1I8 757 aaPredicted RBP8.71□□□□□ -1.02
PMS1-219ENST00000483293 NMIQ13287 307 aaPredicted RBP8.7□□□□□ -1.02
PMS1-219ENST00000483293 BMS1Q14692 1282 aaKnown RBP8.7□□□□□ -1.02
PMS1-219ENST00000483293 PPP2R5DQ14738 602 aa8.7□□□□□ -1.02
PMS1-219ENST00000483293 CPSF6Q16630 551 aaKnown RBP eCLIP8.7□□□□□ -1.02
PMS1-219ENST00000483293 IFI16Q16666 785 aaKnown RBP8.7□□□□□ -1.02
PMS1-219ENST00000483293 CCDC144BQ3MJ40 725 aa8.7□□□□□ -1.02
PMS1-219ENST00000483293 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
PMS1-219ENST00000483293 DUSP15Q9H1R2 295 aaPredicted RBP8.7□□□□□ -1.02
PMS1-219ENST00000483293 ZSWIM4Q9H7M6 989 aa8.7□□□□□ -1.02
PMS1-219ENST00000483293 RNF112Q9ULX5 631 aa8.7□□□□□ -1.02
PMS1-219ENST00000483293 TMEM265A0A087WTH1 108 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 SHOXO15266 292 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 CD247P20963 164 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 NCAPHQ15003 741 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 TCEAL1Q15170 157 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 SOGA3Q5TF21 947 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 OSBPL2Q9H1P3 480 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 MKNK2Q9HBH9 465 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 GP6Q9HCN6 339 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 SIRPGQ9P1W8 387 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 SUGT1Q9Y2Z0 365 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 ST14Q9Y5Y6 855 aa8.69□□□□□ -1.02
PMS1-219ENST00000483293 CBFA2T2O43439 604 aa8.68□□□□□ -1.02
PMS1-219ENST00000483293 PRAMEF1O95521 474 aa8.68□□□□□ -1.02
PMS1-219ENST00000483293 TPP2P29144 1249 aaPredicted RBP8.68□□□□□ -1.02
PMS1-219ENST00000483293 SV2CQ496J9 727 aa8.68□□□□□ -1.02
PMS1-219ENST00000483293 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
PMS1-219ENST00000483293 PIWIL2Q8TC59 973 aaKnown RBP8.68□□□□□ -1.02
PMS1-219ENST00000483293 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
PMS1-219ENST00000483293 SRPK1Q96SB4 655 aaKnown RBP8.68□□□□□ -1.02
PMS1-219ENST00000483293 DSCC1Q9BVC3 393 aa8.68□□□□□ -1.02
PMS1-219ENST00000483293 ATP13A1Q9HD20 1204 aa8.68□□□□□ -1.02
PMS1-219ENST00000483293 SUSD2Q9UGT4 822 aa8.68□□□□□ -1.02
PMS1-219ENST00000483293 FAM221BA6H8Z2 402 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 ZNF445P59923 1031 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 MSMPQ1L6U9 139 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 INTS5Q6P9B9 1019 aaKnown RBP8.67□□□□□ -1.02
PMS1-219ENST00000483293 ZNF574Q6ZN55 896 aaPredicted RBP8.67□□□□□ -1.02
PMS1-219ENST00000483293 HRASLS5Q96KN8 279 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 APBA2Q99767 749 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 KLHL25Q9H0H3 589 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 NOL6Q9H6R4 1146 aaKnown RBP8.67□□□□□ -1.02
PMS1-219ENST00000483293 CHST7Q9NS84 486 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 SEMA3GQ9NS98 782 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 GPATCH2Q9NW75 528 aa8.67□□□□□ -1.02
PMS1-219ENST00000483293 SUSD5O60279 629 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 SERINC3Q13530 473 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 NBPF6Q5VWK0 638 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 CREG2Q8IUH2 290 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 NBPF4Q96M43 638 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 ZDHHC15Q96MV8 337 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 BSDC1Q9NW68 430 aaPredicted RBP8.66□□□□□ -1.02
PMS1-219ENST00000483293 LRP2BPQ9P2M1 347 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 PFDN2Q9UHV9 154 aa8.66□□□□□ -1.02
PMS1-219ENST00000483293 ANKRD34BA5PLL1 514 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 ITGA4P13612 1032 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 SPRED2Q7Z698 418 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 LRRN4CLQ8ND94 238 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 DEPDC7Q96QD5 511 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 GPR62Q9BZJ7 368 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 GBP3Q9H0R5 595 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 TRIT1Q9H3H1 467 aaKnown RBP8.65□□□□□ -1.02
PMS1-219ENST00000483293 PIF1Q9H611 641 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
PMS1-219ENST00000483293 PITPNM2Q9BZ72 1349 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 PDPK1O15530 556 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 SIGLEC6O43699 453 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 VAMP4O75379 141 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 PPM1BO75688 479 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 CLCN7P51798 805 aa8.64□□□□□ -1.03
PMS1-219ENST00000483293 PRKCQQ04759 706 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms