RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 FMNL2Q96PY5 1086 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 EXOC6BQ9Y2D4 811 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 ADCY9O60503 1353 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 COL15A1P39059 1388 aa9.24□□□□□ -0.93
SNX13-208ENST00000482558 PKD1L3Q7Z443 1732 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 PARP4Q9UKK3 1724 aaKnown RBP9.23□□□□□ -0.93
SNX13-208ENST00000482558 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 HIP1O00291 1037 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 GLRX3O76003 335 aaKnown RBP9.23□□□□□ -0.93
SNX13-208ENST00000482558 DGKZQ13574 1117 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 SHISA2Q6UWI4 295 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
SNX13-208ENST00000482558 CLASRPQ8N2M8 674 aaKnown RBP9.23□□□□□ -0.93
SNX13-208ENST00000482558 RUFY2Q8WXA3 655 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 JPH1Q9HDC5 661 aaPredicted RBP9.23□□□□□ -0.93
SNX13-208ENST00000482558 STIM2Q9P246 746 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 LRFN2Q9ULH4 789 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 RNF112Q9ULX5 631 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 SLC6A14Q9UN76 642 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.23□□□□□ -0.93
SNX13-208ENST00000482558 MAP3K2Q9Y2U5 619 aa9.23□□□□□ -0.93
SNX13-208ENST00000482558 CRYBG1Q9Y4K1 1723 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 GRM8O00222 908 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 TNFRSF10BO14763 440 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 CHMLP26374 656 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 RAB3GAP1Q15042 981 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 OTUD7AQ8TE49 926 aaPredicted RBP9.22□□□□□ -0.93
SNX13-208ENST00000482558 BHMTQ93088 406 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 UBE2OQ9C0C9 1292 aaKnown RBP9.22□□□□□ -0.93
SNX13-208ENST00000482558 USP21Q9UK80 565 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 PCDH11XQ9BZA7 1347 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 PCDH11YQ9BZA8 1340 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 STRCP1A6NGW2 1772 aa9.22□□□□□ -0.93
SNX13-208ENST00000482558 KCNQ3O43525 872 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 SORBS3O60504 671 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 NBPF7P0C2Y1 421 aaPredicted RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 TNNI2P48788 182 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 AFF1P51825 1210 aaKnown RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 CABP4P57796 275 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 SETQ01105 290 aaPredicted RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 OS9Q13438 667 aaPredicted RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 BMS1Q14692 1282 aaKnown RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 DTWD1Q8N5C7 304 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 HSH2DQ96JZ2 352 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 UBA5Q9GZZ9 404 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 PARP2Q9UGN5 583 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 DMGDHQ9UI17 866 aaKnown RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 WDR17Q8IZU2 1322 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 RGPD5Q99666 1765 aa9.21□□□□□ -0.94
SNX13-208ENST00000482558 KDM6AO15550 1401 aaPredicted RBP9.21□□□□□ -0.94
SNX13-208ENST00000482558 STK10O94804 968 aaKnown RBP9.2□□□□□ -0.94
SNX13-208ENST00000482558 NPR3P17342 541 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 G3BP1Q13283 466 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNX13-208ENST00000482558 HIF1AQ16665 826 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 C11orf91Q3C1V1 193 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 KIAA1211Q6ZU35 1233 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 BRINP3Q76B58 766 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 TMC4Q7Z404 712 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 INTS4Q96HW7 963 aaKnown RBP9.2□□□□□ -0.94
SNX13-208ENST00000482558 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 METTL22Q9BUU2 404 aaPredicted RBP9.2□□□□□ -0.94
SNX13-208ENST00000482558 CARD10Q9BWT7 1032 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 RBCK1Q9BYM8 510 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 PCDH12Q9NPG4 1184 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 KLK14Q9P0G3 267 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 VTI1BQ9UEU0 232 aa9.2□□□□□ -0.94
SNX13-208ENST00000482558 TUBGCP6Q96RT7 1819 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 PRPF40AO75400 957 aaKnown RBP9.19□□□□□ -0.94
SNX13-208ENST00000482558 IFIT2P09913 472 aaKnown RBP9.19□□□□□ -0.94
SNX13-208ENST00000482558 EIF1AXP47813 144 aaKnown RBP9.19□□□□□ -0.94
SNX13-208ENST00000482558 FMR1Q06787 632 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX13-208ENST00000482558 PLEKHG6Q3KR16 790 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 SPTY2D1Q68D10 685 aaPredicted RBP9.19□□□□□ -0.94
SNX13-208ENST00000482558 MCTP1Q6DN14 999 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 ALKBH2Q6NS38 261 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 TMC7Q7Z402 723 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 APBB1IPQ7Z5R6 666 aaPredicted RBP9.19□□□□□ -0.94
SNX13-208ENST00000482558 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 SLC51AQ86UW1 340 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 RILPL2Q969X0 211 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 MRFAP1L1Q96HT8 127 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 FAM161BQ96MY7 647 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 TEX13AQ9BXU3 409 aaPredicted RBP9.19□□□□□ -0.94
SNX13-208ENST00000482558 PRDM11Q9NQV5 511 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 ECHDC1Q9NTX5 307 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 INPP5FQ9Y2H2 1132 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 MRPL42Q9Y6G3 142 aaKnown RBP9.19□□□□□ -0.94
SNX13-208ENST00000482558 MEGF6O75095 1541 aa9.19□□□□□ -0.94
SNX13-208ENST00000482558 LDHBP07195 334 aaKnown RBP9.18□□□□□ -0.94
SNX13-208ENST00000482558 PSAPL1Q6NUJ1 521 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 ZNF280CQ8ND82 737 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 PLBD2Q8NHP8 589 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 PI4K2BQ8TCG2 481 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 RAD50Q92878 1312 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 TNPO1Q92973 898 aaKnown RBP9.18□□□□□ -0.94
SNX13-208ENST00000482558 EVI5LQ96CN4 794 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 IRF2BPLQ9H1B7 796 aa9.18□□□□□ -0.94
SNX13-208ENST00000482558 KRTAP4-8A0A0G2JLE6 195 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms