RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 APBA2Q99767 749 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 SPATC1LQ9H0A9 340 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 SLC15A5A6NIM6 579 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 TSPY2A6NKD2 308 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 ORC4O43929 436 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 FGRP09769 529 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 ZKSCAN1P17029 563 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-213ENST00000482192 PTPREP23469 700 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 MAP2K5Q13163 448 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 PLS1Q14651 629 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 TTC22Q5TAA0 569 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-213ENST00000482192 GMCL1P1Q8NEA9 526 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 U2AF1L4Q8WU68 220 aaKnown RBP14.09□□□□□ -0.15
HMGN1-213ENST00000482192 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
HMGN1-213ENST00000482192 PAK6Q9NQU5 681 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-213ENST00000482192 FBXO28Q9NVF7 368 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 ADAMTS5Q9UNA0 930 aa14.09□□□□□ -0.15
HMGN1-213ENST00000482192 PLXNB2O15031 1838 aa14.08□□□□□ -0.15
HMGN1-213ENST00000482192 STRNO43815 780 aa14.08□□□□□ -0.16
HMGN1-213ENST00000482192 RANBP6O60518 1105 aaKnown RBP14.08□□□□□ -0.16
HMGN1-213ENST00000482192 PCP11498 1178 aaKnown RBP14.08□□□□□ -0.16
HMGN1-213ENST00000482192 CAPN2P17655 700 aa14.08□□□□□ -0.16
HMGN1-213ENST00000482192 GRB14Q14449 540 aa14.08□□□□□ -0.16
HMGN1-213ENST00000482192 LRRC47Q8N1G4 583 aaKnown RBP14.08□□□□□ -0.16
HMGN1-213ENST00000482192 SHISA4Q96DD7 197 aa14.08□□□□□ -0.16
HMGN1-213ENST00000482192 NUP88Q99567 741 aaPredicted RBP14.08□□□□□ -0.16
HMGN1-213ENST00000482192 SLF1Q9BQI6 1058 aa14.08□□□□□ -0.16
HMGN1-213ENST00000482192 MROH8Q9H579 483 aa14.08□□□□□ -0.16
HMGN1-213ENST00000482192 INCENPQ9NQS7 918 aa14.08□□□□□ -0.16
HMGN1-213ENST00000482192 RLFQ13129 1914 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 VWA5AO00534 786 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 SGPL1O95470 568 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 HOXC6P09630 235 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 GSPT1P15170 499 aaKnown RBP14.07□□□□□ -0.16
HMGN1-213ENST00000482192 ERCC3P19447 782 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 TMEM132BQ14DG7 1078 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 DEFB118Q96PH6 123 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.07□□□□□ -0.162e-13■■■■□ 21.6
HMGN1-213ENST00000482192 HMX1Q9NP08 348 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-213ENST00000482192 TOMM22Q9NS69 142 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 STX8Q9UNK0 236 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
HMGN1-213ENST00000482192 SLC25A27O95847 323 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 PRKAR2AP13861 404 aaKnown RBP14.06□□□□□ -0.16
HMGN1-213ENST00000482192 HAND2P61296 217 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 TRIM32Q13049 653 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 CCL14Q16627 93 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
HMGN1-213ENST00000482192 MAP3K21Q5TCX8 1036 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 SLFN13Q68D06 897 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 MFSD6Q6ZSS7 791 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 NCAPG2Q86XI2 1143 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 ABRAQ8N0Z2 381 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 PRPF38AQ8NAV1 312 aaKnown RBP14.06□□□□□ -0.16
HMGN1-213ENST00000482192 RNF41Q9H4P4 317 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-213ENST00000482192 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 TACC3Q9Y6A5 838 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 PARP14Q460N5 1801 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 ZNF236Q9UL36 1845 aa14.06□□□□□ -0.16
HMGN1-213ENST00000482192 ZNF213O14771 459 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 NMT2O60551 498 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 BMP3P12645 472 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 ADORA2AP29274 412 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 COPB2P35606 906 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 DPP9Q86TI2 863 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 REPS2Q8NFH8 660 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 STAG1Q8WVM7 1258 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 GMCL1Q96IK5 515 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 DSCC1Q9BVC3 393 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 NBPF3Q9H094 633 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 FEM1BQ9UK73 627 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 ZNF214Q9UL59 606 aaPredicted RBP14.05□□□□□ -0.16
HMGN1-213ENST00000482192 RAD50Q92878 1312 aa14.05□□□□□ -0.16
HMGN1-213ENST00000482192 TFRCP02786 760 aaKnown RBP14.04□□□□□ -0.16
HMGN1-213ENST00000482192 FCER1AP12319 257 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 STAT3P40763 770 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 SLC1A4P43007 532 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 NOVP48745 357 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 NT5C2P49902 561 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
HMGN1-213ENST00000482192 MFSD14CQ5VZR4 134 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 TBC1D10CQ8IV04 446 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 RUFY2Q8WXA3 655 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 TEX13BQ9BXU2 312 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 SLC5A4Q9NY91 659 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 CTNNA3Q9UI47 895 aa14.04□□□□□ -0.16
HMGN1-213ENST00000482192 ISY1Q9ULR0 285 aaKnown RBP14.04□□□□□ -0.16
HMGN1-213ENST00000482192 CTDP1Q9Y5B0 961 aaPredicted RBP14.04□□□□□ -0.16
HMGN1-213ENST00000482192 ATP2A1O14983 1001 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 ZBED4O75132 1171 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 FARP2O94887 1054 aaPredicted RBP14.03□□□□□ -0.16
HMGN1-213ENST00000482192 STAT2P52630 851 aa14.03□□□□□ -0.16
HMGN1-213ENST00000482192 CACNB2Q08289 660 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms