RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 DGKHQ86XP1 1220 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 TPH2Q8IWU9 490 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 ENOX1Q8TC92 643 aaKnown RBP4.23□□□□□ -1.73
SMC6-208ENST00000481708 LUZP4Q9P127 313 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 CHMP3Q9Y3E7 222 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 IPPQ9Y573 584 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 CRB1P82279 1406 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 ENC1O14682 589 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 MYL1P05976 194 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 GPSM2P81274 684 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 CCDC85BQ15834 202 aaPredicted RBP4.23□□□□□ -1.73
SMC6-208ENST00000481708 SEPT7Q16181 437 aaKnown RBP4.23□□□□□ -1.73
SMC6-208ENST00000481708 SLC4A10Q6U841 1118 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 RNF217Q8TC41 542 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 COG1Q8WTW3 980 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 NAP1L5Q96NT1 182 aaPredicted RBP4.23□□□□□ -1.73
SMC6-208ENST00000481708 ZNF700Q9H0M5 742 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 LZTS1Q9Y250 596 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 DLG5Q8TDM6 1919 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 RTL1A6NKG5 1358 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 EPB41L2O43491 1005 aaKnown RBP4.23□□□□□ -1.73
SMC6-208ENST00000481708 KRT18P05783 430 aaKnown RBP4.23□□□□□ -1.73
SMC6-208ENST00000481708 LDHCP07864 332 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 GPC1P35052 558 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 SLC27A3Q5K4L6 730 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 TCEAL8Q8IYN2 117 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 MAGEB6Q8N7X4 407 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 C1orf127Q8N9H9 656 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 MFSD3Q96ES6 412 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 HSH2DQ96JZ2 352 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 CEP89Q96ST8 783 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 YIPF4Q9BSR8 244 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 MUC3BQ9H195 1237 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 ABCB6Q9NP58 842 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 STRIP2Q9ULQ0 834 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 SLX4Q8IY92 1834 aa4.23□□□□□ -1.73
SMC6-208ENST00000481708 TSEN34Q9BSV6 310 aaKnown RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 CAPN5O15484 640 aaPredicted RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 ABLIM3O94929 683 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 F13A1P00488 732 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 EPB42P16452 691 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 L1CAMP32004 1257 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 VEGFBP49765 207 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 RASSF7Q02833 373 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 CLCQ05315 142 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 OS9Q13438 667 aaPredicted RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 TCIRG1Q13488 830 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 CAMK2GQ13555 558 aaPredicted RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 SAFB2Q14151 953 aaKnown RBP eCLIP4.22□□□□□ -1.73
SMC6-208ENST00000481708 SEZ6Q53EL9 994 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 LARP1BQ659C4 914 aaKnown RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 FAM196AQ6ZSG2 479 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 CENPOQ9BU64 300 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 SLC12A5Q9H2X9 1139 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 POLMQ9NP87 494 aaPredicted RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 AFF2P51816 1311 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 FAM221AA4D161 298 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 KLRG2A4D1S0 409 aaPredicted RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 VSTM5A8MXK1 200 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 PLSCR1O15162 318 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 TLR3O15455 904 aaKnown RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 BMP1P13497 986 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 POU4F2Q12837 409 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 ZYXQ15942 572 aaKnown RBP4.22□□□□□ -1.73
SMC6-208ENST00000481708 FAM102BQ5T8I3 360 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 NXNQ6DKJ4 435 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 PRICKLE2Q7Z3G6 844 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 CHPFQ8IZ52 775 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 CEP63Q96MT8 703 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 ACTR10Q9NZ32 417 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 SWAP70Q9UH65 585 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 SALL4Q9UJQ4 1053 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 PLAAQ9Y263 795 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 SPATA31A1Q5TZJ5 1347 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 PLEKHH1Q9ULM0 1364 aa4.22□□□□□ -1.73
SMC6-208ENST00000481708 SPATA31C2B4DYI2 1134 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 APAF1O14727 1248 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 RASGRP1O95267 797 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 PMLP29590 882 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 ID4P47928 161 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 CACTIN-AS1Q8N1I8 211 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 CHAC2Q8WUX2 184 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 KISS1RQ969F8 398 aaPredicted RBP4.21□□□□□ -1.73
SMC6-208ENST00000481708 LRRC59Q96AG4 307 aaKnown RBP4.21□□□□□ -1.73
SMC6-208ENST00000481708 CAAP1Q9H8G2 361 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 ANLNQ9NQW6 1124 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 PCDHGB3Q9Y5G1 929 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 MAST2Q6P0Q8 1798 aa4.21□□□□□ -1.73
SMC6-208ENST00000481708 SELPP16109 830 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 POU5F1BQ06416 359 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 PERM1Q5SV97 790 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 IFNL3Q8IZI9 196 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 CBARPQ8N350 705 aaPredicted RBP4.21□□□□□ -1.74
SMC6-208ENST00000481708 AIDAQ96BJ3 306 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 SUSD3Q96L08 255 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 CRTAC1Q9NQ79 661 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 DDX20Q9UHI6 824 aaKnown RBP4.21□□□□□ -1.74
SMC6-208ENST00000481708 PCDHB5Q9Y5E4 795 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 FZD9O00144 591 aa4.21□□□□□ -1.74
SMC6-208ENST00000481708 ACPPP15309 386 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms