RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 PARK7Q99497 189 aaKnown RBP12.53□□□□□ -0.4
SSBP1-210ENST00000481508 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
SSBP1-210ENST00000481508 TSPY2A6NKD2 308 aa12.52□□□□□ -0.41
SSBP1-210ENST00000481508 SOX1O00570 391 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-210ENST00000481508 MYCP01106 439 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-210ENST00000481508 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-210ENST00000481508 CHMP4CQ96CF2 233 aa12.52□□□□□ -0.41
SSBP1-210ENST00000481508 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
SSBP1-210ENST00000481508 NUP88Q99567 741 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-210ENST00000481508 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
SSBP1-210ENST00000481508 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-210ENST00000481508 VCPKMTQ9H867 229 aa12.52□□□□□ -0.41
SSBP1-210ENST00000481508 ZNF287Q9HBT7 754 aa12.52□□□□□ -0.41
SSBP1-210ENST00000481508 TXNRD2Q9NNW7 524 aa12.52□□□□□ -0.41
SSBP1-210ENST00000481508 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-210ENST00000481508 NYAP2Q9P242 653 aa12.52□□□□□ -0.41
SSBP1-210ENST00000481508 B4E1Z4 1266 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 NDUFB10O96000 172 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 NOVP48745 357 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 USP14P54578 494 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 IMMTQ16891 758 aaKnown RBP12.51□□□□□ -0.41
SSBP1-210ENST00000481508 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 MFSD6Q6ZSS7 791 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 ANKRD13CQ8N6S4 541 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 PTPN22Q9Y2R2 807 aa12.51□□□□□ -0.41
SSBP1-210ENST00000481508 SMCHD1A6NHR9 2005 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
SSBP1-210ENST00000481508 RAD21O60216 631 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 KDM4AO75164 1064 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 CNMDO75829 334 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 TTLL1O95922 423 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 OSBPP22059 807 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 HERVK_113P62684 666 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
SSBP1-210ENST00000481508 SP3Q02447 781 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 CYB5R4Q7L1T6 521 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 SMCR8Q8TEV9 937 aaPredicted RBP12.5□□□□□ -0.41
SSBP1-210ENST00000481508 MKL1Q969V6 931 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 ARMC5Q96C12 935 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 PNMA3Q9UL41 463 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 F5H6K3 240 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 SLC27A2O14975 620 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 LACTBP83111 547 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-210ENST00000481508 KLRC3Q07444 240 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 Q3C1V9 767 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 TANGO6Q9C0B7 1094 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-210ENST00000481508 TCP11L1Q9NUJ3 509 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 ZSWIM5Q9P217 1185 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 RBPJLQ9UBG7 517 aa12.49□□□□□ -0.41
SSBP1-210ENST00000481508 E7EWF7 191 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 WDR46O15213 610 aaKnown RBP12.48□□□□□ -0.41
SSBP1-210ENST00000481508 PCP11498 1178 aaKnown RBP12.48□□□□□ -0.41
SSBP1-210ENST00000481508 ANTXR2P58335 489 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 PABPC4Q13310 644 aaKnown RBP eCLIP12.48□□□□□ -0.412e-25■■■□□ 18
SSBP1-210ENST00000481508 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 SLFN13Q68D06 897 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 KIAA1211Q6ZU35 1233 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 GMCL1P1Q8NEA9 526 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 LPAR1Q92633 364 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 ESR2Q92731 530 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 ATG4CQ96DT6 458 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 ZNF333Q96JL9 665 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 TRIM47Q96LD4 638 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 TMEM47Q9BQJ4 181 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 SH2D4AQ9H788 454 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 GOPCQ9HD26 462 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 BTBD7Q9P203 1132 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 STX8Q9UNK0 236 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 MTMR7Q9Y216 660 aa12.48□□□□□ -0.41
SSBP1-210ENST00000481508 PRUNE2Q8WUY3 3088 aa12.47□□□□□ -0.41
SSBP1-210ENST00000481508 ZNFX1Q9P2E3 1918 aaKnown RBP12.47□□□□□ -0.41
SSBP1-210ENST00000481508 FLOT1O75955 427 aa12.47□□□□□ -0.41
SSBP1-210ENST00000481508 FAM110CQ1W6H9 321 aa12.47□□□□□ -0.41
SSBP1-210ENST00000481508 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
SSBP1-210ENST00000481508 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
SSBP1-210ENST00000481508 PAGR1Q9BTK6 254 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms